RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TRGV1A0A0A0MS02 117 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 NABP1Q96AH0 204 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 SELENOKQ9Y6D0 94 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 FNDC10F2Z333 226 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 NMSQ5H8A3 153 aa13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 ZNF625Q96I27 306 aaPredicted RBP13.87□□□□□ -0.19
SMCHD1-201ENST00000320876 TMEM14EPQ6UXP3 125 aa13.86□□□□□ -0.19
SMCHD1-201ENST00000320876 GFI1Q99684 422 aa13.86□□□□□ -0.19
SMCHD1-201ENST00000320876 IGHV2-26A0A0B4J1V2 119 aa13.86□□□□□ -0.19
SMCHD1-201ENST00000320876 A0A1B0GWJ7 208 aa13.86□□□□□ -0.19
SMCHD1-201ENST00000320876 TMEM75Q8N9X5 138 aa13.86□□□□□ -0.19
SMCHD1-201ENST00000320876 SPXQ9BT56 116 aa13.86□□□□□ -0.19
SMCHD1-201ENST00000320876 FXYD7P58549 80 aa13.86□□□□□ -0.19
SMCHD1-201ENST00000320876 C9orf139Q6ZV77 190 aa13.86□□□□□ -0.19
SMCHD1-201ENST00000320876 SPATA31B1PQ5VZV4 182 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 C14orf178Q8N769 122 aaPredicted RBP13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 SNHG12Q9BXW3 62 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 MED13LQ71F56 2210 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 GAGE1Q13065 139 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 ZNF329Q86UD4 541 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 C20orf144Q9BQM9 153 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 NUP210Q8TEM1 1887 aaPredicted RBP13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 Q0VG73 95 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 RNASE6Q93091 150 aaKnown RBP13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 UBL5Q9BZL1 73 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 LYL1P12980 280 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 CD24P25063 80 aa13.85□□□□□ -0.19
SMCHD1-201ENST00000320876 C1orf159Q96HA4 380 aa13.84□□□□□ -0.19
SMCHD1-201ENST00000320876 TMEM141Q96I45 108 aa13.84□□□□□ -0.19
SMCHD1-201ENST00000320876 IGKV1D-8A0A087WSZ0 117 aa13.84□□□□□ -0.19
SMCHD1-201ENST00000320876 UTF1Q5T230 341 aa13.84□□□□□ -0.19
SMCHD1-201ENST00000320876 ATP6V0BQ99437 205 aa13.84□□□□□ -0.19
SMCHD1-201ENST00000320876 FAM231BA6NCW3 169 aa13.84□□□□□ -0.19
SMCHD1-201ENST00000320876 THBDP07204 575 aa13.83□□□□□ -0.19
SMCHD1-201ENST00000320876 ZNF883P0CG24 379 aa13.83□□□□□ -0.19
SMCHD1-201ENST00000320876 FAM223BA6NKX1 122 aa13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 CDKN1AP38936 164 aa13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 UBE2DNLQ8IWF7 75 aa13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 FAM223AQ8IWN6 122 aa13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 MRPL14Q6P1L8 145 aaKnown RBP13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 RNF5Q99942 180 aa13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 WFDC12Q8WWY7 111 aa13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 IL18BPO95998 194 aa13.83□□□□□ -0.2
SMCHD1-201ENST00000320876 POLR3KQ9Y2Y1 108 aaPredicted RBP13.82□□□□□ -0.2
SMCHD1-201ENST00000320876 USMG5Q96IX5 58 aa13.82□□□□□ -0.2
SMCHD1-201ENST00000320876 A0A087WV48 116 aa13.82□□□□□ -0.2
SMCHD1-201ENST00000320876 LCNL1Q6ZST4 164 aa13.82□□□□□ -0.2
SMCHD1-201ENST00000320876 TGFBR3LH3BV60 316 aa13.82□□□□□ -0.2
SMCHD1-201ENST00000320876 PRB3Q04118 309 aaPredicted RBP13.82□□□□□ -0.2
SMCHD1-201ENST00000320876 DSCR8Q96T75 97 aa13.82□□□□□ -0.2
SMCHD1-201ENST00000320876 TRPT1Q86TN4 253 aaKnown RBP13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 C9orf106Q8NAJ2 232 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 AMN1Q8IY45 258 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 CEP192Q8TEP8 1941 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 MINOS1Q5TGZ0 78 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 MINOS1-NBL1R4GNA1 71 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 COL4A1P02462 1669 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 ARHGAP32A7KAX9 2087 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 SP9P0CG40 484 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 Q86TA4 180 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 BMPERQ8N8U9 685 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 PSCAO43653 123 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 IGHV1-8P0DP01 117 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 Q8TAT8 98 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 LIME1Q9H400 295 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 ADAMTS9Q9P2N4 1935 aa13.81□□□□□ -0.2
SMCHD1-201ENST00000320876 TCF15Q12870 199 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 TRAV40A0A0B4J280 105 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 VMO1Q7Z5L0 202 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 IGHV1-3A0A0C4DH29 117 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 SRRM5B3KS81 715 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 STPG4Q8N801 248 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 OR11H6Q8NGC7 330 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 SRSF8Q9BRL6 282 aaKnown RBP13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 K7EP34 96 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 H0YJW9 148 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 EREGO14944 169 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 TMEM258P61165 79 aa13.8□□□□□ -0.2
SMCHD1-201ENST00000320876 ZNF106Q9H2Y7 1883 aaKnown RBP13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 TRAV13-1A0A0B4J241 112 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 OOSP1A8MZH6 123 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 TMEM200BQ69YZ2 307 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 SMKR1H3BMG3 65 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 K7EP13 123 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 TRBV6-6A0A0A6YYG2 114 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 IGHV1-18A0A0C4DH31 117 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 SAP30O75446 220 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 SLAQ13239 276 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 ZNF114Q8NC26 417 aa13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 RPUSD1Q9UJJ7 312 aaKnown RBP13.79□□□□□ -0.2
SMCHD1-201ENST00000320876 IGKV1-5P01602 117 aa13.78□□□□□ -0.2
SMCHD1-201ENST00000320876 IGHV1-24A0A0C4DH33 117 aa13.78□□□□□ -0.2
SMCHD1-201ENST00000320876 TNRC6BQ9UPQ9 1833 aaKnown RBP13.78□□□□□ -0.2
SMCHD1-201ENST00000320876 BOD1L2Q8IYS8 172 aa13.78□□□□□ -0.2
SMCHD1-201ENST00000320876 RFNGQ9Y644 331 aa13.78□□□□□ -0.2
SMCHD1-201ENST00000320876 CRYGSP22914 178 aa13.78□□□□□ -0.2
SMCHD1-201ENST00000320876 TSSC4Q9Y5U2 329 aaPredicted RBP13.78□□□□□ -0.2
SMCHD1-201ENST00000320876 IGLV3-12A0A075B6K2 115 aa13.77□□□□□ -0.2
SMCHD1-201ENST00000320876 FCN3O75636 299 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms