RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 DMXL1Q9Y485 3027 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 TRBV19A0A075B6N1 114 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 RBPJQ06330 500 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 Q6ZS92 163 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 RASL11BQ9BPW5 248 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 NGBQ9NPG2 151 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 A0A096LNJ9 63 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 C16orf97H3BN30 126 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 K7EM74 188 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 KIR3DS1Q14943 382 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 PRSS57Q6UWY2 283 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 GTF2H5Q6ZYL4 71 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 TMEM75Q8N9X5 138 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 PRSS3P2Q8NHM4 247 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 AP1S3Q96PC3 154 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 TPPP3Q9BW30 176 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 FBXL15Q9H469 300 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 INSIG2Q9Y5U4 225 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 IGHV1-3A0A0C4DH29 117 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 H3BRM9 83 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 THBDP07204 575 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 IFI27P40305 119 aaPredicted RBP10.62□□□□□ -0.71
SKA3-202ENST00000314759 FA2HQ7L5A8 372 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 KAAG1Q9UBP8 84 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 CUL9Q8IWT3 2517 aa10.62□□□□□ -0.71
SKA3-202ENST00000314759 TPRP12270 2363 aaKnown RBP10.62□□□□□ -0.71
SKA3-202ENST00000314759 A0A0G2JLM5 398 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 K7EP34 96 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 GOSR1O95249 250 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 IGLV1-47P01700 117 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 CSN1S1P47710 185 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 SIGLEC15Q6ZMC9 328 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 OR10AG1Q8NH19 301 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 CLEC2AQ6UVW9 174 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 FAM57AQ8TBR7 257 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 SHANK2-AS3Q9BTD1 123 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 THYN1Q9P016 225 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 PSG3Q16557 428 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 OR1N2Q8NGR9 330 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 OR2K2Q8NGT1 345 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 RNASE6Q93091 150 aaKnown RBP10.61□□□□□ -0.71
SKA3-202ENST00000314759 SCNM1Q9BWG6 230 aa10.61□□□□□ -0.71
SKA3-202ENST00000314759 A0A0G2JNJ9 132 aa10.6□□□□□ -0.71
SKA3-202ENST00000314759 NEGR1Q7Z3B1 354 aa10.6□□□□□ -0.71
SKA3-202ENST00000314759 Q9UFV3 132 aa10.6□□□□□ -0.71
SKA3-202ENST00000314759 OTOGLQ3ZCN5 2332 aa10.6□□□□□ -0.71
SKA3-202ENST00000314759 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
SKA3-202ENST00000314759 M0R3E3 92 aa10.6□□□□□ -0.71
SKA3-202ENST00000314759 TMEM11P17152 192 aa10.6□□□□□ -0.71
SKA3-202ENST00000314759 NHLH1Q02575 133 aa10.6□□□□□ -0.71
SKA3-202ENST00000314759 TACC2O95359 2948 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 A0A1B0GW15 77 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 BOD1L2Q8IYS8 172 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 TNFRSF14Q92956 283 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 C8orf49Q96NF6 230 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 BSNQ9UPA5 3926 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 A6NDN8 102 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 H3BRN7 92 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 K7EIM0 57 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 TM4SF20Q53R12 229 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 ZNF493Q6ZR52 646 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 PCP2Q8IVA1 136 aa10.59□□□□□ -0.71
SKA3-202ENST00000314759 D6R8Y8 96 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 K7EQM0 130 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 CACNG7P62955 275 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 ADAMTSL5Q6ZMM2 481 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 SIGLEC8Q9NYZ4 499 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 SERTM2A0A1B0GWG4 89 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 TMEM213A2RRL7 107 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 MRPS12O15235 138 aaKnown RBP10.58□□□□□ -0.72
SKA3-202ENST00000314759 ZGRF1Q86YA3 2104 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 LYPD1Q8N2G4 141 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 ZNF491Q8N8L2 437 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 ZNF414Q96IQ9 312 aa10.58□□□□□ -0.72
SKA3-202ENST00000314759 A1L4Q6 167 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 Q6AWC8 147 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 BCL6BQ8N143 479 aaPredicted RBP10.57□□□□□ -0.72
SKA3-202ENST00000314759 NPFFR1Q9GZQ6 430 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 ATMQ13315 3056 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 SMAD7O15105 426 aaKnown RBP10.57□□□□□ -0.72
SKA3-202ENST00000314759 APOBEC3AP31941 199 aaPredicted RBP10.57□□□□□ -0.72
SKA3-202ENST00000314759 PLGLAQ15195 96 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 AMN1Q8IY45 258 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 ABHD17AQ96GS6 310 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 DYNLRB1Q9NP97 96 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 JKAMPQ9P055 326 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 SPCS1Q9Y6A9 102 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 CSMD1Q96PZ7 3565 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 TMSB15BA0A087X1C1 80 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 A0A1W2PPM0 123 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 IL4P05112 153 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 COX7A1P24310 79 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 FCGR2BP31994 310 aaPredicted RBP10.57□□□□□ -0.72
SKA3-202ENST00000314759 WFDC3Q8IUB2 231 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 RNF125Q96EQ8 232 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 RALYQ9UKM9 306 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms