RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 OR1N2Q8NGR9 330 aa10.21□□□□□ -0.78
RETREG3-201ENST00000309428 IGHV2-26A0A0B4J1V2 119 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 IGLV1-44P01699 117 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 CD3EP07766 207 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 ARMS2P0C7Q2 107 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 Q6ZS92 163 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 C1orf162Q8NEQ5 155 aaPredicted RBP10.2□□□□□ -0.78
RETREG3-201ENST00000309428 SPOCK3Q9BQ16 436 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 IGHV1-24A0A0C4DH33 117 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 S100A4P26447 101 aaKnown RBP10.2□□□□□ -0.78
RETREG3-201ENST00000309428 NDFIP1Q9BT67 221 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 CFHR2P36980 270 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 HIST1H1AQ02539 215 aaPredicted RBP10.2□□□□□ -0.78
RETREG3-201ENST00000309428 FAM169BQ8N8A8 192 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 WFDC12Q8WWY7 111 aa10.2□□□□□ -0.78
RETREG3-201ENST00000309428 RPUSD1Q9UJJ7 312 aaKnown RBP10.2□□□□□ -0.78
RETREG3-201ENST00000309428 IGKV1OR2-108A0A075B7D4 117 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 A0A0G2JLM5 398 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 ITGB1BP1O14713 200 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
RETREG3-201ENST00000309428 IGLC7A0M8Q6 106 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 NDUFS7O75251 213 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 IFI27P40305 119 aaPredicted RBP10.19□□□□□ -0.78
RETREG3-201ENST00000309428 RBPJQ06330 500 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 BVES-AS1Q5T3Y7 98 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 ZNF502Q8TBZ5 544 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 HIST1H4GQ99525 98 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 FOXA2Q9Y261 457 aaPredicted RBP10.19□□□□□ -0.78
RETREG3-201ENST00000309428 D6R8Y8 96 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 J3QW42 95 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 KIR3DS1Q14943 382 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 SAMD13Q5VXD3 122 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 PRSS33Q8NF86 280 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 CRYBG3Q68DQ2 2970 aa10.19□□□□□ -0.78
RETREG3-201ENST00000309428 CELSR1Q9NYQ6 3014 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 RNASE2P10153 161 aaKnown RBP10.18□□□□□ -0.78
RETREG3-201ENST00000309428 RNASE6Q93091 150 aaKnown RBP10.18□□□□□ -0.78
RETREG3-201ENST00000309428 C19orf24Q9BVV8 132 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 NGBQ9NPG2 151 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 ZNF257Q9Y2Q1 563 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 TNRC6BQ9UPQ9 1833 aaKnown RBP10.18□□□□□ -0.78
RETREG3-201ENST00000309428 RPL7P18124 248 aaKnown RBP10.18□□□□□ -0.78
RETREG3-201ENST00000309428 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 FOXC2Q99958 501 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 JKAMPQ9P055 326 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 MRPL36Q9P0J6 103 aaKnown RBP10.18□□□□□ -0.78
RETREG3-201ENST00000309428 MRPL27Q9P0M9 148 aaKnown RBP10.18□□□□□ -0.78
RETREG3-201ENST00000309428 TCRBV4S1A1TA0A5B7 111 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 ZNF329Q86UD4 541 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 TTTY13Q9BZ97 58 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 CTSZQ9UBR2 303 aa10.18□□□□□ -0.78
RETREG3-201ENST00000309428 NPIPB5A8MRT5 1133 aa10.17□□□□□ -0.78
RETREG3-201ENST00000309428 E7EQL1 145 aa10.17□□□□□ -0.78
RETREG3-201ENST00000309428 ZNF788Q6ZQV5 615 aa10.17□□□□□ -0.78
RETREG3-201ENST00000309428 Q8TAT8 98 aa10.17□□□□□ -0.78
RETREG3-201ENST00000309428 COL25A1Q9BXS0 654 aaPredicted RBP10.17□□□□□ -0.78
RETREG3-201ENST00000309428 LINC00527Q9UJ94 153 aa10.17□□□□□ -0.78
RETREG3-201ENST00000309428 IGHV2-70DA0A0C4DH43 119 aa10.17□□□□□ -0.78
RETREG3-201ENST00000309428 SMIM13P0DJ93 91 aa10.17□□□□□ -0.78
RETREG3-201ENST00000309428 ZNF418Q8TF45 676 aaPredicted RBP10.17□□□□□ -0.78
RETREG3-201ENST00000309428 GTSCR1Q86UQ5 136 aa10.17□□□□□ -0.78
RETREG3-201ENST00000309428 TMEM213A2RRL7 107 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 CIDEAO60543 219 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 RBX1P62877 108 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 FLNCQ14315 2725 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 TCRAP04437 139 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 PRR20EP86478 221 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 PRR20CP86479 221 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 PRR20DP86480 221 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 PRR20BP86481 221 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 PRR20AP86496 221 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 WT1-ASQ06250 92 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 Q1RN00 199 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 ACANP16112 2415 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 PPIAL4CA0A0B4J2A2 164 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 SMIM27A0A1W2PRY6 76 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 PPIAL4GP0DN37 164 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 PET117Q6UWS5 81 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 BCL6BQ8N143 479 aaPredicted RBP10.16□□□□□ -0.78
RETREG3-201ENST00000309428 FER1L6-AS1Q8NA97 138 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 C11orf52Q96A22 123 aa10.16□□□□□ -0.78
RETREG3-201ENST00000309428 A0A1B0GWB2 263 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 NDUFA3O95167 84 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 CDKN1BP46527 198 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 OSR1Q8TAX0 266 aaPredicted RBP10.15□□□□□ -0.78
RETREG3-201ENST00000309428 CACNG8Q8WXS5 425 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 SLC25A2Q9BXI2 301 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 UBTD1Q9HAC8 227 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 K7ERJ3 54 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 GDF5OSQ5U4N7 250 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 MRPL52Q86TS9 123 aaKnown RBP10.15□□□□□ -0.78
RETREG3-201ENST00000309428 TMEM14BQ9NUH8 114 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 LY96Q9Y6Y9 160 aa10.15□□□□□ -0.78
RETREG3-201ENST00000309428 THBDP07204 575 aa10.15□□□□□ -0.79
RETREG3-201ENST00000309428 MGPP08493 103 aa10.15□□□□□ -0.79
RETREG3-201ENST00000309428 MEF2CQ06413 473 aaPredicted RBP10.14□□□□□ -0.79
RETREG3-201ENST00000309428 SPANXN1Q5VSR9 72 aa10.14□□□□□ -0.79
RETREG3-201ENST00000309428 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
RETREG3-201ENST00000309428 RABAC1Q9UI14 185 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms