RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GGCTO75223 188 aaKnown RBP9.16□□□□□ -0.94
TRIM40-205ENST00000307859 S100A9P06702 114 aaKnown RBP9.16□□□□□ -0.94
TRIM40-205ENST00000307859 PF4V1P10720 104 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 S100PP25815 95 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 RAB9AP51151 201 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 SMIM12Q96EX1 92 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 FAM210BQ96KR6 192 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 C17orf77Q96MU5 243 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 KLK15Q9H2R5 256 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 SONP18583 2426 aaKnown RBP9.16□□□□□ -0.94
TRIM40-205ENST00000307859 TRAV34A0A0B4J273 112 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 TMEM89A2RUT3 159 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 PPP5D1E7EU14 171 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 SLC17A3O00476 420 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 HOXA3O43365 443 aaPredicted RBP9.16□□□□□ -0.94
TRIM40-205ENST00000307859 IGHG4P01861 327 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 RAB5BP61020 215 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 KRTAP1-1Q07627 177 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 TMEM95Q3KNT9 176 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 EXOC3-AS1Q8N2X6 119 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 FMC1Q96HJ9 113 aa9.16□□□□□ -0.94
TRIM40-205ENST00000307859 A0A0G2JLM5 398 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 BUB3O43684 328 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 ZNF253O75346 499 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 PSMB8P28062 276 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 ARL3P36405 182 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
TRIM40-205ENST00000307859 FOXL1Q12952 345 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 OR5I1Q13606 314 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 KCNIP4Q6PIL6 250 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 BAGE2Q86Y30 109 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 OR8I2Q8N0Y5 310 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 PRSS22Q9GZN4 317 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 ZNF702PQ9H963 129 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 OSTCQ9NRP0 149 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 U3KQE9 123 aa9.15□□□□□ -0.94
TRIM40-205ENST00000307859 IGHV3OR16-8A0A075B7F1 116 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 A0A087X0K7 114 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 TRBV6-1A0A0K0K1D8 114 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 TRBV12-3P01733 135 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 RPL15P61313 204 aaKnown RBP9.14□□□□□ -0.95
TRIM40-205ENST00000307859 UBE2G1P62253 170 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 C1orf194Q5T5A4 169 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 CMTM2Q8TAZ6 248 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 GPR82Q96P67 336 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 METTL26Q96S19 204 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 NPFFR1Q9GZQ6 430 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 RPH3ALQ9UNE2 315 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 SMAD5-AS1Q9Y6J3 95 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 V9GYV3 84 aa9.14□□□□□ -0.95
TRIM40-205ENST00000307859 NDUFA4O00483 81 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 LTAP01374 205 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 TYMSP04818 313 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 PSG9Q00887 426 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 FAM231DQ6ZW35 169 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 ZFP82Q8N141 532 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 TMEM86BQ8N661 226 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 ARL6IP6Q8N6S5 226 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 MLST8Q9BVC4 326 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 SRD5A3Q9H8P0 318 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 IL36BQ9NZH7 164 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 TRAV9-1A0A075B6T8 112 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 A0A1W2PPQ1 181 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 CD5LO43866 347 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 IGLV2-11P01706 119 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 MGST1P10620 155 aaKnown RBP9.13□□□□□ -0.95
TRIM40-205ENST00000307859 FAM209BQ5JX69 171 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 Q86TA4 180 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 Q8N2B8 174 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 SIGLECL1Q8N7X8 197 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 TMEM75Q8N9X5 138 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 NHLRC2Q8NBF2 726 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 BTF3L4Q96K17 158 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 AAMDCQ9H7C9 122 aa9.13□□□□□ -0.95
TRIM40-205ENST00000307859 DIRC3C9JPN6 131 aa9.12□□□□□ -0.95
TRIM40-205ENST00000307859 IGHV3-11P01762 117 aa9.12□□□□□ -0.95
TRIM40-205ENST00000307859 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
TRIM40-205ENST00000307859 LCNL1Q6ZST4 164 aa9.12□□□□□ -0.95
TRIM40-205ENST00000307859 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
TRIM40-205ENST00000307859 IL17RELQ6ZVW7 336 aa9.12□□□□□ -0.95
TRIM40-205ENST00000307859 RNASE7Q9H1E1 156 aaKnown RBP9.12□□□□□ -0.95
TRIM40-205ENST00000307859 SERTM2A0A1B0GWG4 89 aa9.11□□□□□ -0.95
TRIM40-205ENST00000307859 ZNF320A2RRD8 509 aa9.11□□□□□ -0.95
TRIM40-205ENST00000307859 PHOX2AO14813 284 aa9.11□□□□□ -0.95
TRIM40-205ENST00000307859 APOHP02749 345 aaPredicted RBP9.11□□□□□ -0.95
TRIM40-205ENST00000307859 FAM3BP58499 235 aaPredicted RBP9.11□□□□□ -0.95
TRIM40-205ENST00000307859 MYOZ3Q8TDC0 251 aa9.11□□□□□ -0.95
TRIM40-205ENST00000307859 SGK494Q96LW2 274 aa9.11□□□□□ -0.95
TRIM40-205ENST00000307859 ZNF331Q9NQX6 463 aaPredicted RBP9.11□□□□□ -0.95
TRIM40-205ENST00000307859 K7EQM0 130 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 M0R3E3 92 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 TRGC2P03986 189 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 SLC35B1P78383 322 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 FOXE3Q13461 319 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 RPEL1Q2QD12 228 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 KRTAP24-1Q3LI83 254 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 C16orf54Q6UWD8 224 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 C10orf99Q6UWK7 81 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms