RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 Q6ZWC4 215 aa8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 MIR17HGQ75NE6 70 aa8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 OR4B1Q8NGF8 309 aa8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 PSMG3Q9BT73 122 aaPredicted RBP8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 SLC25A2Q9BXI2 301 aa8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 CLEC5AQ9NY25 188 aa8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 TMEM14CQ9P0S9 112 aa8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 TP53TG1Q9Y2A0 90 aa8.1□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 HMSDA8MTL9 139 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 H3BMM0 161 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 SPRY2O43597 315 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 JTBO76095 146 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 IGKV3-20P01619 116 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 MBP02144 154 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 SNRPCP09234 159 aaKnown RBP8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 IGLC2P0DOY2 106 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 PYYP10082 97 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 ATP6V0CP27449 155 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 RPL7L1Q6DKI1 246 aaKnown RBP8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 OR2G3Q8NGZ4 309 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 GNPNAT1Q96EK6 184 aaPredicted RBP8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 C20orf173Q96LM9 149 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 ARPC5LQ9BPX5 153 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 PAXXQ9BUH6 204 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 C1QTNF4Q9BXJ3 329 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 OR51M1Q9H341 326 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 AAMDCQ9H7C9 122 aa8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 ZNF331Q9NQX6 463 aaPredicted RBP8.09□□□□□ -1.11
CSPG4P2Y-201ENST00000306853 TRAV8-2A0A0B4J237 113 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 A0A0D9SG52 128 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 A0A0J9YX75 114 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 H3BTX0 84 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 ZNF253O75346 499 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 DUSP14O95147 198 aaKnown RBP8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 HIST1H1EP10412 219 aaKnown RBP8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 RAB2AP61019 212 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 UBE2L3P68036 154 aaKnown RBP8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 SERF2P84101 59 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 PSG9Q00887 426 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 PDE6HQ13956 83 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 PSG3Q16557 428 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 GDF5OSQ5U4N7 250 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 IGFL4Q6B9Z1 124 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 FAM122CQ6P4D5 195 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 AKAP14Q86UN6 197 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 OR10G4Q8NGN3 311 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 OR10G9Q8NGN4 311 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 OR10G7Q8NGN6 311 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 BLNKQ8WV28 456 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 C17orf77Q96MU5 243 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 WWC2-AS2Q96NR7 200 aa8.08□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 TRBV19A0A075B6N1 114 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 F6UB75 175 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 H3BQ15 152 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 SLC17A3O00476 420 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 PFDN1O60925 122 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 OR10J4P0C629 311 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 C4BPBP20851 252 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 HLA-DMBP28068 263 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 CDC34P49427 236 aaPredicted RBP8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 DEFB1P60022 68 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 HIST1H1AQ02539 215 aaPredicted RBP8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 TCTE3Q8IZS6 198 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 KCNRGQ8N5I3 272 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 RNF183Q96D59 192 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 ST6GAL2Q96JF0 529 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 OVOL2Q9BRP0 275 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 SH3BGRL3Q9H299 93 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 PPP1R14DQ9NXH3 145 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 ZNF586Q9NXT0 402 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 RFNGQ9Y644 331 aa8.07□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 NBEAP1P0C6P0 100 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 EIF5AP63241 154 aaKnown RBP8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 AKR1C8PQ5T2L2 129 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 PQLC2Q6ZP29 291 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 OR11H4Q8NGC9 324 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 RNF141Q8WVD5 230 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 RPUSD4Q96CM3 377 aaKnown RBP8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 MRPL53Q96EL3 112 aaKnown RBP8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 SAT2Q96F10 170 aaPredicted RBP8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 FAM167A-AS1Q96KT0 104 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 CLUHP3Q96NS8 147 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 ZNF471Q9BX82 626 aaPredicted RBP8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 PRELID1Q9Y255 219 aa8.06□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 BCL2L11O43521 198 aa8.05□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 CNN1P51911 297 aaKnown RBP8.05□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 FXYD7P58549 80 aa8.05□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 OR8A1Q8NGG7 326 aa8.05□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 RARRES2Q99969 163 aa8.05□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 ACTR3CQ9C0K3 210 aaPredicted RBP8.05□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 XCL2Q9UBD3 114 aa8.05□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 C1QBP02746 253 aa8.04□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 AMBPP02760 352 aa8.04□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 ZNF705DP0CH99 300 aaPredicted RBP8.04□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 ZNF705BP0CI00 300 aaPredicted RBP8.04□□□□□ -1.12
CSPG4P2Y-201ENST00000306853 IQCF2Q8IXL9 164 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms