RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 Q86TA4 180 aa8.17□□□□□ -1.1
CLP1-201ENST00000302731 RNASE7Q9H1E1 156 aaKnown RBP8.17□□□□□ -1.1
CLP1-201ENST00000302731 KLK15Q9H2R5 256 aa8.17□□□□□ -1.1
CLP1-201ENST00000302731 RPH3ALQ9UNE2 315 aa8.17□□□□□ -1.1
CLP1-201ENST00000302731 ZFP30Q9Y2G7 519 aa8.17□□□□□ -1.1
CLP1-201ENST00000302731 SMAD5-AS1Q9Y6J3 95 aa8.17□□□□□ -1.1
CLP1-201ENST00000302731 CSPG4Q6UVK1 2322 aa8.17□□□□□ -1.1
CLP1-201ENST00000302731 VPS13CQ709C8 3753 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 SMIM27A0A1W2PRY6 76 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 ZNF320A2RRD8 509 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 UBE2CO00762 179 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 HOXA3O43365 443 aaPredicted RBP8.16□□□□□ -1.1
CLP1-201ENST00000302731 PSG3Q16557 428 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 COX19Q49B96 90 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 CT83Q5H943 113 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 OR4X2Q8NGF9 303 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 SLC50A1Q9BRV3 221 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 ZNF331Q9NQX6 463 aaPredicted RBP8.16□□□□□ -1.1
CLP1-201ENST00000302731 CHD6Q8TD26 2715 aa8.16□□□□□ -1.1
CLP1-201ENST00000302731 POLQO75417 2590 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 ZNF705GA8MUZ8 300 aaPredicted RBP8.15□□□□□ -1.1
CLP1-201ENST00000302731 GATCO43716 136 aaKnown RBP8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BKO60814 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BJP06899 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BOP23527 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BBP33778 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BDP58876 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 SNRPEP62304 92 aaKnown RBP8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BCP62807 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 SLC35B1P78383 322 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST2H2BEQ16778 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 ACTL10Q5JWF8 245 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.15□□□□□ -1.1
CLP1-201ENST00000302731 Q8N2B8 174 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 CIARTQ8N365 385 aaPredicted RBP8.15□□□□□ -1.1
CLP1-201ENST00000302731 NHLRC2Q8NBF2 726 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 NUDT10Q8NFP7 164 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 FRZBQ92765 325 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BHQ93079 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 NUDT11Q96G61 164 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 GRAMD2BQ96HH9 432 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BNQ99877 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 HIST1H2BMQ99879 126 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 SAV1Q9H4B6 383 aaPredicted RBP8.15□□□□□ -1.1
CLP1-201ENST00000302731 ZNF702PQ9H963 129 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 CLEC5AQ9NY25 188 aa8.15□□□□□ -1.1
CLP1-201ENST00000302731 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 ZNF785A8K8V0 405 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 ELANEP08246 267 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 TRGC1P0CF51 173 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 C16orf54Q6UWD8 224 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 PSG8Q9UQ74 426 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 CREBBPQ92793 2442 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 IGHV3OR16-8A0A075B7F1 116 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 TRAV8-1A0A0A6YYK1 113 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 A0A1W2PS18 150 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 M0R3E3 92 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 CD5LO43866 347 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 TRBV12-3P01733 135 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 FOXE3Q13461 319 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 TMEM95Q3KNT9 176 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 COX8CQ7Z4L0 72 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 RNF152Q8N8N0 203 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 OR4B1Q8NGF8 309 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 MYOZ3Q8TDC0 251 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 MRPL53Q96EL3 112 aaKnown RBP8.14□□□□□ -1.11
CLP1-201ENST00000302731 SGK494Q96LW2 274 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 SERTAD4Q9NUC0 356 aa8.14□□□□□ -1.11
CLP1-201ENST00000302731 PEF1Q9UBV8 284 aaKnown RBP8.14□□□□□ -1.11
CLP1-201ENST00000302731 CELSR2Q9HCU4 2923 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 SVEP1Q4LDE5 3571 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 RBAKDNA6NC62 111 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 IZUMO1RA6ND01 250 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 NPIPB6E9PJ23 425 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 K7EMT4 169 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 IGHV3-11P01762 117 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 PRR27Q6MZM9 219 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 RASL11AQ6T310 242 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 PRNTQ86SH4 94 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 GPHB5Q86YW7 130 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 SIGLECL1Q8N7X8 197 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 TSKUQ8WUA8 353 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 GLMPQ8WWB7 406 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 DAZAP1Q96EP5 407 aaKnown RBP8.13□□□□□ -1.11
CLP1-201ENST00000302731 GFRA4Q9GZZ7 299 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 ABCA12Q86UK0 2595 aa8.13□□□□□ -1.11
CLP1-201ENST00000302731 CSMD2Q7Z408 3487 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 CHEK1O14757 476 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 SMAD7O15105 426 aaKnown RBP8.12□□□□□ -1.11
CLP1-201ENST00000302731 P01737 135 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 APOHP02749 345 aaPredicted RBP8.12□□□□□ -1.11
CLP1-201ENST00000302731 MT-ND6P03923 174 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 HOXA5P20719 270 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 KRTAP1-1Q07627 177 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 FABP9Q0Z7S8 132 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 WDR73Q6P4I2 378 aa8.12□□□□□ -1.11
CLP1-201ENST00000302731 UNQ9165/PRO28630Q6UXU0 137 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms