RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 IGLV1-44P01699 117 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 PRR20EP86478 221 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 PRR20CP86479 221 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 PRR20DP86480 221 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 PRR20BP86481 221 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 PRR20AP86496 221 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 GTF2H5Q6ZYL4 71 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 RITA1Q96K30 269 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 USP24Q9UPU5 2620 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 IGHV1-8P0DP01 117 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 MEF2CQ06413 473 aaPredicted RBP11.32□□□□□ -0.6
SDC2-201ENST00000302190 Q8TAT8 98 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 ABCA2Q9BZC7 2435 aa11.32□□□□□ -0.6
SDC2-201ENST00000302190 YPEL3P61236 119 aaPredicted RBP11.31□□□□□ -0.6
SDC2-201ENST00000302190 RBPMS2Q6ZRY4 209 aaKnown RBP11.31□□□□□ -0.6
SDC2-201ENST00000302190 NPIPB5A8MRT5 1133 aa11.31□□□□□ -0.6
SDC2-201ENST00000302190 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
SDC2-201ENST00000302190 MRPL36Q9P0J6 103 aaKnown RBP11.31□□□□□ -0.6
SDC2-201ENST00000302190 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
SDC2-201ENST00000302190 NCR2O95944 276 aa11.31□□□□□ -0.6
SDC2-201ENST00000302190 HLA-DRB1P01911 266 aa11.31□□□□□ -0.6
SDC2-201ENST00000302190 SEM1Q6ZVN7 128 aa11.31□□□□□ -0.6
SDC2-201ENST00000302190 GPR183P32249 361 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 DSCAML1Q8TD84 2053 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 IGHV2-26A0A0B4J1V2 119 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
SDC2-201ENST00000302190 VWC2Q2TAL6 325 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 C12orf54Q6X4T0 127 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 ZNF329Q86UD4 541 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 SLC25A2Q9BXI2 301 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 TRAV9-1A0A075B6T8 112 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 TRAV9-2A0A087WT02 112 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 TCRAP04437 139 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 HTN1P15515 57 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 TMEM167AQ8TBQ9 72 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
SDC2-201ENST00000302190 SAMD13Q5VXD3 122 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 IGKV2-40A0A087WW87 121 aaPredicted RBP11.29□□□□□ -0.6
SDC2-201ENST00000302190 A0A087X0K7 114 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 SAP30O75446 220 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 IGKV2D-40P01614 121 aaPredicted RBP11.29□□□□□ -0.6
SDC2-201ENST00000302190 LIPFP07098 398 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 LY6DQ14210 128 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 MRPS16Q9Y3D3 137 aaKnown RBP11.29□□□□□ -0.6
SDC2-201ENST00000302190 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 TP73-AS1Q9UF72 201 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 HIVEP3Q5T1R4 2406 aa11.29□□□□□ -0.6
SDC2-201ENST00000302190 P0C879 139 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 GCSHP23434 173 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 MFAP4P55083 255 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
SDC2-201ENST00000302190 DPM3Q9P2X0 92 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 DSCAMO60469 2012 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 OR10AG1Q8NH19 301 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 C7orf71A4D174 169 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 SPANXN1Q5VSR9 72 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
SDC2-201ENST00000302190 IGHV1-3A0A0C4DH29 117 aa11.27□□□□□ -0.6
SDC2-201ENST00000302190 F5H697 171 aa11.27□□□□□ -0.6
SDC2-201ENST00000302190 ARMS2P0C7Q2 107 aa11.27□□□□□ -0.6
SDC2-201ENST00000302190 EVI2AP22794 236 aa11.27□□□□□ -0.6
SDC2-201ENST00000302190 ATP5IP56385 69 aaPredicted RBP11.27□□□□□ -0.6
SDC2-201ENST00000302190 SIGLEC9Q9Y336 463 aa11.27□□□□□ -0.6
SDC2-201ENST00000302190 CSMD1Q96PZ7 3565 aa11.27□□□□□ -0.6
SDC2-201ENST00000302190 PRELID3AQ96N28 172 aa11.27□□□□□ -0.61
SDC2-201ENST00000302190 MSRB2Q9Y3D2 182 aa11.27□□□□□ -0.61
SDC2-201ENST00000302190 E7EQL1 145 aa11.27□□□□□ -0.61
SDC2-201ENST00000302190 Q6ZS92 163 aa11.27□□□□□ -0.61
SDC2-201ENST00000302190 POLQO75417 2590 aa11.27□□□□□ -0.61
SDC2-201ENST00000302190 B9A039 149 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 MGPP08493 103 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 PEF1Q9UBV8 284 aaKnown RBP11.26□□□□□ -0.61
SDC2-201ENST00000302190 CSMD2Q7Z408 3487 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 Q0VG73 95 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 LY6EQ16553 131 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 LINC00173Q6ZV60 143 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 CTSZQ9UBR2 303 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 IGLL1P15814 213 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 C8orf46Q8TAG6 207 aa11.26□□□□□ -0.61
SDC2-201ENST00000302190 IGLV3-9A0A075B6K5 115 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 A0A1B0GV72 72 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 PLP1P60201 277 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 KHDC1LQ5JSQ8 128 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 DDB2Q92466 427 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 LOXP28300 417 aaPredicted RBP11.25□□□□□ -0.61
SDC2-201ENST00000302190 CACNG7P62955 275 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 PATE2Q6UY27 113 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 OR5AN1Q8NGI8 311 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 ZNF672Q499Z4 452 aaPredicted RBP11.25□□□□□ -0.61
SDC2-201ENST00000302190 C11orf52Q96A22 123 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 RNF114Q9Y508 228 aa11.25□□□□□ -0.61
SDC2-201ENST00000302190 CFHR2P36980 270 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms