RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ZNF702PQ9H963 129 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 IL36BQ9NZH7 164 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 U3KQE9 123 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 A0A0G2JLM5 398 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 C10orf99Q6UWK7 81 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 METTL26Q96S19 204 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 SRD5A3Q9H8P0 318 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 IGHV3-66A0A0C4DH42 116 aa17.14■□□□□ 0.33
SMAD1-201ENST00000302085 LTAP01374 205 aa17.14■□□□□ 0.33
SMAD1-201ENST00000302085 PSMB8P28062 276 aa17.14■□□□□ 0.33
SMAD1-201ENST00000302085 KRTAP1-1Q07627 177 aa17.14■□□□□ 0.33
SMAD1-201ENST00000302085 MLST8Q9BVC4 326 aa17.14■□□□□ 0.33
SMAD1-201ENST00000302085 IGHV3OR16-13A0A075B7E8 117 aa17.13■□□□□ 0.33
SMAD1-201ENST00000302085 TRAV8-1A0A0A6YYK1 113 aa17.13■□□□□ 0.33
SMAD1-201ENST00000302085 IGHV3-74A0A0B4J1X5 117 aa17.13■□□□□ 0.33
SMAD1-201ENST00000302085 PRB4P10163 310 aaPredicted RBP17.13■□□□□ 0.33
SMAD1-201ENST00000302085 PSG9Q00887 426 aa17.13■□□□□ 0.33
SMAD1-201ENST00000302085 IGHV3-49A0A0A0MS15 119 aa17.13■□□□□ 0.33
SMAD1-201ENST00000302085 M0R3E3 92 aa17.13■□□□□ 0.33
SMAD1-201ENST00000302085 TYMSP04818 313 aa17.13■□□□□ 0.33
SMAD1-201ENST00000302085 IBA57Q5T440 356 aaKnown RBP17.13■□□□□ 0.33
SMAD1-201ENST00000302085 NPFFR1Q9GZQ6 430 aa17.13■□□□□ 0.33
SMAD1-201ENST00000302085 DIRC3C9JPN6 131 aa17.12■□□□□ 0.33
SMAD1-201ENST00000302085 PHOX2AO14813 284 aa17.12■□□□□ 0.33
SMAD1-201ENST00000302085 C1orf194Q5T5A4 169 aa17.12■□□□□ 0.33
SMAD1-201ENST00000302085 UNQ9165/PRO28630Q6UXU0 137 aa17.12■□□□□ 0.33
SMAD1-201ENST00000302085 SMIM12Q96EX1 92 aa17.12■□□□□ 0.33
SMAD1-201ENST00000302085 DUX5Q96PT3 197 aa17.12■□□□□ 0.33
SMAD1-201ENST00000302085 AAMDCQ9H7C9 122 aa17.12■□□□□ 0.33
SMAD1-201ENST00000302085 BIN3Q9NQY0 253 aa17.12■□□□□ 0.33
SMAD1-201ENST00000302085 UNC79Q9P2D8 2635 aa17.11■□□□□ 0.33
SMAD1-201ENST00000302085 NDUFA4O00483 81 aa17.11■□□□□ 0.33
SMAD1-201ENST00000302085 SAV1Q9H4B6 383 aaPredicted RBP17.11■□□□□ 0.33
SMAD1-201ENST00000302085 GCN1Q92616 2671 aaKnown RBP17.11■□□□□ 0.33
SMAD1-201ENST00000302085 TRBV6-1A0A0K0K1D8 114 aa17.11■□□□□ 0.33
SMAD1-201ENST00000302085 TMEM89A2RUT3 159 aa17.11■□□□□ 0.33
SMAD1-201ENST00000302085 ZNF785A8K8V0 405 aa17.11■□□□□ 0.33
SMAD1-201ENST00000302085 FAM231DQ6ZW35 169 aa17.11■□□□□ 0.33
SMAD1-201ENST00000302085 Q86TA4 180 aa17.11■□□□□ 0.33
SMAD1-201ENST00000302085 TEX29Q8N6K0 151 aa17.11■□□□□ 0.33
SMAD1-201ENST00000302085 ITPR2Q14571 2701 aa17.1■□□□□ 0.33
SMAD1-201ENST00000302085 A0A087X0K7 114 aa17.1■□□□□ 0.33
SMAD1-201ENST00000302085 ZNF320A2RRD8 509 aa17.1■□□□□ 0.33
SMAD1-201ENST00000302085 ZNF253O75346 499 aa17.1■□□□□ 0.33
SMAD1-201ENST00000302085 RPEL1Q2QD12 228 aa17.1■□□□□ 0.33
SMAD1-201ENST00000302085 NUDT10Q8NFP7 164 aa17.1■□□□□ 0.33
SMAD1-201ENST00000302085 NUDT11Q96G61 164 aa17.1■□□□□ 0.33
SMAD1-201ENST00000302085 MXRA5Q9NR99 2828 aa17.1■□□□□ 0.33
SMAD1-201ENST00000302085 SNRPEP62304 92 aaKnown RBP17.09■□□□□ 0.33
SMAD1-201ENST00000302085 IGFL4Q6B9Z1 124 aa17.09■□□□□ 0.33
SMAD1-201ENST00000302085 PRNTQ86SH4 94 aa17.09■□□□□ 0.33
SMAD1-201ENST00000302085 TMEM75Q8N9X5 138 aa17.09■□□□□ 0.33
SMAD1-201ENST00000302085 SERTAD4Q9NUC0 356 aa17.09■□□□□ 0.33
SMAD1-201ENST00000302085 PRR27Q6MZM9 219 aa17.09■□□□□ 0.33
SMAD1-201ENST00000302085 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.09■□□□□ 0.33
SMAD1-201ENST00000302085 Q71RC1 249 aaPredicted RBP17.09■□□□□ 0.33
SMAD1-201ENST00000302085 FRZBQ92765 325 aa17.09■□□□□ 0.33
SMAD1-201ENST00000302085 ZNF331Q9NQX6 463 aaPredicted RBP17.09■□□□□ 0.33
SMAD1-201ENST00000302085 ZNF705GA8MUZ8 300 aaPredicted RBP17.08■□□□□ 0.33
SMAD1-201ENST00000302085 CD5LO43866 347 aa17.08■□□□□ 0.33
SMAD1-201ENST00000302085 LINC00322Q6ZN03 302 aaPredicted RBP17.08■□□□□ 0.33
SMAD1-201ENST00000302085 TMEM183AQ8IXX5 376 aa17.08■□□□□ 0.33
SMAD1-201ENST00000302085 TLN2Q9Y4G6 2542 aa17.08■□□□□ 0.32
SMAD1-201ENST00000302085 FLNAP21333 2647 aaKnown RBP17.08■□□□□ 0.32
SMAD1-201ENST00000302085 C5orf52A6NGY3 159 aa17.08■□□□□ 0.32
SMAD1-201ENST00000302085 HLA-DMBP28068 263 aa17.08■□□□□ 0.32
SMAD1-201ENST00000302085 PSG3Q16557 428 aa17.08■□□□□ 0.32
SMAD1-201ENST00000302085 BTF3L4Q96K17 158 aa17.08■□□□□ 0.32
SMAD1-201ENST00000302085 PEF1Q9UBV8 284 aaKnown RBP17.08■□□□□ 0.32
SMAD1-201ENST00000302085 PSG8Q9UQ74 426 aa17.08■□□□□ 0.32
SMAD1-201ENST00000302085 ZNF469Q96JG9 3925 aaPredicted RBP17.07■□□□□ 0.32
SMAD1-201ENST00000302085 TRAV9-1A0A075B6T8 112 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 K7EQM0 130 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BKO60814 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 S100A6P06703 90 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BJP06899 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BOP23527 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BBP33778 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 CSN1S1P47710 185 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BDP58876 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BCP62807 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST2H2BEQ16778 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 FAM209BQ5JX69 171 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.07■□□□□ 0.32
SMAD1-201ENST00000302085 C16orf54Q6UWD8 224 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 Q8N2B8 174 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BHQ93079 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BNQ99877 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 HIST1H2BMQ99879 126 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 YAE1D1Q9NRH1 226 aa17.07■□□□□ 0.32
SMAD1-201ENST00000302085 GATCO43716 136 aaKnown RBP17.06■□□□□ 0.32
SMAD1-201ENST00000302085 RPLP1P05386 114 aaKnown RBP17.06■□□□□ 0.32
SMAD1-201ENST00000302085 TRGC1P0CF51 173 aa17.06■□□□□ 0.32
SMAD1-201ENST00000302085 ARL6IP6Q8N6S5 226 aa17.06■□□□□ 0.32
SMAD1-201ENST00000302085 SMIM27A0A1W2PRY6 76 aa17.06■□□□□ 0.32
SMAD1-201ENST00000302085 CA1P00915 261 aaPredicted RBP17.06■□□□□ 0.32
SMAD1-201ENST00000302085 TMEM86BQ8N661 226 aa17.06■□□□□ 0.32
SMAD1-201ENST00000302085 ASCL2Q99929 193 aa17.06■□□□□ 0.32
SMAD1-201ENST00000302085 SLC35B1P78383 322 aa17.05■□□□□ 0.32
SMAD1-201ENST00000302085 FOXE3Q13461 319 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms