RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 KCNIP2Q9NS61 270 aa13.63□□□□□ -0.23
CCDC78-201ENST00000293889 WI2-2373I1.2A0A1W2PRP0 233 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 LINC00587B1AMM8 73 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 LINC01619G3V211 115 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 PPP1R2P9O14990 202 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 PDE6DO43924 150 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 TYMSP04818 313 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 RPEL1Q2QD12 228 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 TOMM20LQ6UXN7 152 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 DPF1Q92782 380 aa13.62□□□□□ -0.23
CCDC78-201ENST00000293889 IGHV3OR16-8A0A075B7F1 116 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 F6UZH7 168 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 CCL24O00175 119 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 IL4P05112 153 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 HOXD3P31249 432 aaPredicted RBP13.61□□□□□ -0.23
CCDC78-201ENST00000293889 ADIRFQ15847 76 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 PYY3Q5JQD4 70 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 ZFAND3Q9H8U3 227 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 H7BYZ3 331 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 NDUFA4O00483 81 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 SLURP1P55000 103 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 LYZP61626 148 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 GCSAMLQ5JQS6 135 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 UNQ9165/PRO28630Q6UXU0 137 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 GPHB5Q86YW7 130 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 RNF125Q96EQ8 232 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 IMMP2LQ96T52 175 aa13.61□□□□□ -0.23
CCDC78-201ENST00000293889 PAGE4O60829 102 aa13.6□□□□□ -0.23
CCDC78-201ENST00000293889 ORM2P19652 201 aa13.6□□□□□ -0.23
CCDC78-201ENST00000293889 PLP1P60201 277 aa13.6□□□□□ -0.23
CCDC78-201ENST00000293889 FHL3Q13643 280 aa13.6□□□□□ -0.23
CCDC78-201ENST00000293889 USF2Q15853 346 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-201ENST00000293889 OR1B1Q8NGR6 318 aa13.6□□□□□ -0.23
CCDC78-201ENST00000293889 GATAD1Q8WUU5 269 aa13.6□□□□□ -0.23
CCDC78-201ENST00000293889 RPUSD4Q96CM3 377 aaKnown RBP13.6□□□□□ -0.23
CCDC78-201ENST00000293889 BTF3L4Q96K17 158 aa13.6□□□□□ -0.23
CCDC78-201ENST00000293889 STAG3L2P0CL84 134 aa13.59□□□□□ -0.23
CCDC78-201ENST00000293889 STAG3L3P0CL85 134 aa13.59□□□□□ -0.23
CCDC78-201ENST00000293889 NPPCP23582 126 aa13.59□□□□□ -0.23
CCDC78-201ENST00000293889 GALR1P47211 349 aa13.59□□□□□ -0.23
CCDC78-201ENST00000293889 FAM3BP58499 235 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-201ENST00000293889 FAM106AQ4KMX7 169 aa13.59□□□□□ -0.23
CCDC78-201ENST00000293889 PATE2Q6UY27 113 aa13.59□□□□□ -0.23
CCDC78-201ENST00000293889 ZNF320A2RRD8 509 aa13.58□□□□□ -0.24
CCDC78-201ENST00000293889 C11orf94C9JXX5 98 aa13.58□□□□□ -0.24
CCDC78-201ENST00000293889 HYPMO75409 117 aa13.58□□□□□ -0.24
CCDC78-201ENST00000293889 SYNJ2BPP57105 145 aa13.58□□□□□ -0.24
CCDC78-201ENST00000293889 KLF5Q13887 457 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-201ENST00000293889 TMEM37Q8WXS4 190 aa13.58□□□□□ -0.24
CCDC78-201ENST00000293889 TMEM190Q8WZ59 177 aa13.58□□□□□ -0.24
CCDC78-201ENST00000293889 DNAJC4Q9NNZ3 241 aa13.58□□□□□ -0.24
CCDC78-201ENST00000293889 COX7A2P2O60397 106 aa13.57□□□□□ -0.24
CCDC78-201ENST00000293889 OR5G3P0C626 314 aa13.57□□□□□ -0.24
CCDC78-201ENST00000293889 MRPL27Q9P0M9 148 aaKnown RBP13.57□□□□□ -0.24
CCDC78-201ENST00000293889 HMGB3O15347 200 aaKnown RBP13.57□□□□□ -0.24
CCDC78-201ENST00000293889 ZNF207O43670 478 aaKnown RBP13.57□□□□□ -0.24
CCDC78-201ENST00000293889 MYCNOSP40205 109 aa13.57□□□□□ -0.24
CCDC78-201ENST00000293889 C10orf113Q5VZT2 155 aa13.57□□□□□ -0.24
CCDC78-201ENST00000293889 TMEM183AQ8IXX5 376 aa13.57□□□□□ -0.24
CCDC78-201ENST00000293889 OR1L4Q8NGR5 311 aa13.57□□□□□ -0.24
CCDC78-201ENST00000293889 DLX4Q92988 240 aaPredicted RBP13.57□□□□□ -0.24
CCDC78-201ENST00000293889 GPR61Q9BZJ8 451 aa13.57□□□□□ -0.24
CCDC78-201ENST00000293889 ARL2-SNX15V9GYD0 113 aa13.57□□□□□ -0.24
CCDC78-201ENST00000293889 LGALS9O00182 355 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 CXorf1O96002 111 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 REC114Q7Z4M0 266 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 LINC01551Q86U37 167 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 OR10D4PQ8NGN7 298 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 UHRF2Q96PU4 802 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 PFDN5Q99471 154 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 HIGD1AQ9Y241 93 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 TRRAPQ9Y4A5 3859 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 VWFP04275 2813 aa13.56□□□□□ -0.24
CCDC78-201ENST00000293889 WNK1Q9H4A3 2382 aa13.55□□□□□ -0.24
CCDC78-201ENST00000293889 A0A1W2PPV4 95 aa13.55□□□□□ -0.24
CCDC78-201ENST00000293889 TM4SF20Q53R12 229 aa13.55□□□□□ -0.24
CCDC78-201ENST00000293889 ACTL10Q5JWF8 245 aa13.55□□□□□ -0.24
CCDC78-201ENST00000293889 GFI1BQ5VTD9 330 aa13.55□□□□□ -0.24
CCDC78-201ENST00000293889 SEPSECSQ9HD40 501 aaKnown RBP13.55□□□□□ -0.24
CCDC78-201ENST00000293889 RABAC1Q9UI14 185 aa13.55□□□□□ -0.24
CCDC78-201ENST00000293889 METTL26Q96S19 204 aa13.54□□□□□ -0.24
CCDC78-201ENST00000293889 SLC25A39Q9BZJ4 359 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-201ENST00000293889 DAZ1Q9NQZ3 744 aaKnown RBP13.54□□□□□ -0.24
CCDC78-201ENST00000293889 UFC1Q9Y3C8 167 aa13.54□□□□□ -0.24
CCDC78-201ENST00000293889 K7EMT4 169 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 FAM78BQ5VT40 261 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 MORN5Q5VZ52 161 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 SPATA31B1PQ5VZV4 182 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 KCNIP4Q6PIL6 250 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 LINC00305Q7Z4B0 112 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 HIST1H2BLQ99880 126 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 LY96Q9Y6Y9 160 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 IGHV3-49A0A0A0MS15 119 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 TMEM213A2RRL7 107 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 A8MWP6 167 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 APOHP02749 345 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-201ENST00000293889 EDN2P20800 178 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 CRYBB3P26998 211 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms