RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 CRIP1P50238 77 aa13.29□□□□□ -0.28
CHRNE-201ENST00000293780 SIGLEC15Q6ZMC9 328 aa13.29□□□□□ -0.28
CHRNE-201ENST00000293780 ZNF491Q8N8L2 437 aa13.29□□□□□ -0.28
CHRNE-201ENST00000293780 H3BRN7 92 aa13.28□□□□□ -0.28
CHRNE-201ENST00000293780 M0R3E3 92 aa13.28□□□□□ -0.28
CHRNE-201ENST00000293780 IL4P05112 153 aa13.28□□□□□ -0.28
CHRNE-201ENST00000293780 GRNP28799 593 aaKnown RBP13.28□□□□□ -0.28
CHRNE-201ENST00000293780 FCGR2BP31994 310 aaPredicted RBP13.28□□□□□ -0.28
CHRNE-201ENST00000293780 RNF151Q2KHN1 245 aa13.28□□□□□ -0.28
CHRNE-201ENST00000293780 BPIFA4PQ86YQ2 179 aa13.28□□□□□ -0.28
CHRNE-201ENST00000293780 TLN1Q9Y490 2541 aaKnown RBP13.28□□□□□ -0.28
CHRNE-201ENST00000293780 PSG8Q9UQ74 426 aa13.28□□□□□ -0.28
CHRNE-201ENST00000293780 HLA-DRB1P01911 266 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 HTR1DP28221 377 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 ARF6P62330 175 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 VAMP3Q15836 100 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 TPPP3Q9BW30 176 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 A0A1B0GUT8 65 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 A0A1W2PRD5 423 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 A0A1W2PRF3 423 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 A0A1W2PRM7 423 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 ERASQ7Z444 233 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 TMEM75Q8N9X5 138 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 RNF125Q96EQ8 232 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 C8orf49Q96NF6 230 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 PMCHL2Q9BQD1 86 aa13.27□□□□□ -0.29
CHRNE-201ENST00000293780 SPTBN4Q9H254 2564 aa13.26□□□□□ -0.29
CHRNE-201ENST00000293780 MRPS12O15235 138 aaKnown RBP13.26□□□□□ -0.29
CHRNE-201ENST00000293780 ZNF672Q499Z4 452 aaPredicted RBP13.26□□□□□ -0.29
CHRNE-201ENST00000293780 ZNF414Q96IQ9 312 aa13.26□□□□□ -0.29
CHRNE-201ENST00000293780 C1RLQ9NZP8 487 aa13.26□□□□□ -0.29
CHRNE-201ENST00000293780 KLRD1Q13241 179 aa13.25□□□□□ -0.29
CHRNE-201ENST00000293780 PSG3Q16557 428 aa13.25□□□□□ -0.29
CHRNE-201ENST00000293780 MSRB2Q9Y3D2 182 aa13.25□□□□□ -0.29
CHRNE-201ENST00000293780 TRBV6-1A0A0K0K1D8 114 aa13.25□□□□□ -0.29
CHRNE-201ENST00000293780 NEU4Q8WWR8 484 aaPredicted RBP13.25□□□□□ -0.29
CHRNE-201ENST00000293780 RNF5Q99942 180 aa13.25□□□□□ -0.29
CHRNE-201ENST00000293780 TRAV30A0A087WSZ9 112 aa13.24□□□□□ -0.29
CHRNE-201ENST00000293780 FAM90A27PA6NNH2 459 aa13.24□□□□□ -0.29
CHRNE-201ENST00000293780 NBR2O15453 112 aa13.24□□□□□ -0.29
CHRNE-201ENST00000293780 LIPFP07098 398 aa13.24□□□□□ -0.29
CHRNE-201ENST00000293780 MPV17L2Q567V2 206 aa13.24□□□□□ -0.29
CHRNE-201ENST00000293780 MAP1LC3CQ9BXW4 147 aa13.24□□□□□ -0.29
CHRNE-201ENST00000293780 ST20Q9HBF5 79 aa13.24□□□□□ -0.29
CHRNE-201ENST00000293780 RIGQ13278 110 aa13.23□□□□□ -0.29
CHRNE-201ENST00000293780 CFHR4Q92496 578 aa13.23□□□□□ -0.29
CHRNE-201ENST00000293780 TMSB15BA0A087X1C1 80 aa13.23□□□□□ -0.29
CHRNE-201ENST00000293780 WI2-2373I1.2A0A1W2PRP0 233 aa13.23□□□□□ -0.29
CHRNE-201ENST00000293780 SRSF8Q9BRL6 282 aaKnown RBP13.23□□□□□ -0.29
CHRNE-201ENST00000293780 ANKHD1Q8IWZ3 2542 aaKnown RBP13.22□□□□□ -0.29
CHRNE-201ENST00000293780 HES1Q14469 280 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 LY6G5BQ8NDX9 201 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 TMEM191AQ9H0A3 160 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 RNF24Q9Y225 148 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 K7EQM0 130 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 GNG7O60262 68 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 IGHV3-23P01764 117 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 OR5AL1P0C617 328 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 FAM106CPP0CH98 169 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 FAM106AQ4KMX7 169 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 FANCD2OSQ96PS1 177 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 VKORC1Q9BQB6 163 aa13.22□□□□□ -0.29
CHRNE-201ENST00000293780 MUC21A0A0G2JKD1 596 aa13.21□□□□□ -0.29
CHRNE-201ENST00000293780 MUC21A0A140T8X8 626 aa13.21□□□□□ -0.29
CHRNE-201ENST00000293780 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
CHRNE-201ENST00000293780 LYPD1Q8N2G4 141 aa13.21□□□□□ -0.29
CHRNE-201ENST00000293780 PET117Q6UWS5 81 aa13.21□□□□□ -0.29
CHRNE-201ENST00000293780 SERTM2A0A1B0GWG4 89 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 F8W735 103 aaPredicted RBP13.2□□□□□ -0.3
CHRNE-201ENST00000293780 TAX1BP3O14907 124 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 NCR2O95944 276 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 NUDT3O95989 172 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 RHOGP84095 191 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 SCRT2Q9NQ03 307 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 HSPB8Q9UJY1 196 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 NBASA2RRP1 2371 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 SLC25A34Q6PIV7 304 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 NPBQ8NG41 125 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 AP5S1Q9NUS5 200 aa13.2□□□□□ -0.3
CHRNE-201ENST00000293780 LOC389332A0A1B0GUA5 103 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 TMEM213A2RRL7 107 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 NDUFA3O95167 84 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 IFI27P40305 119 aaPredicted RBP13.19□□□□□ -0.3
CHRNE-201ENST00000293780 NDPQ00604 133 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 LOXL1Q08397 574 aaPredicted RBP13.19□□□□□ -0.3
CHRNE-201ENST00000293780 FOXE3Q13461 319 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 CDSNQ15517 529 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 LYZL1Q6UWQ5 148 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 GATD1Q8NB37 220 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 PRSS3P2Q8NHM4 247 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 ASH1LQ9NR48 2969 aaKnown RBP13.19□□□□□ -0.3
CHRNE-201ENST00000293780 HSBP1L1C9JCN9 74 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 PPBPP02775 128 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 C5orf64Q2M2E5 130 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 PTPRQQ9UMZ3 2332 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 SPTA1P02549 2419 aa13.19□□□□□ -0.3
CHRNE-201ENST00000293780 IGLV11-55A0A075B6I3 123 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms