RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 C8orf88P0DMB2 117 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 ATP5IP56385 69 aaPredicted RBP3.6□□□□□ -1.83
NCOA1-201ENST00000288599 DEFB113Q30KQ7 82 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 SEM1Q6ZVN7 128 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 ZAR1Q86SH2 424 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 ZNF645Q8N7E2 425 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 RNF152Q8N8N0 203 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 THSD7BQ9C0I4 1608 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 PDE4DIPQ5VU43 2346 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 SMIM27A0A1W2PRY6 76 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 ACYP1P07311 99 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 ZFP36P26651 326 aaKnown RBP3.6□□□□□ -1.83
NCOA1-201ENST00000288599 ATP1A1-AS1Q5TC04 95 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 CLPSL2Q6UWE3 100 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 SYS1Q8N2H4 156 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 TMEM242Q9NWH2 141 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 CHTOPQ9Y3Y2 248 aaKnown RBP3.6□□□□□ -1.83
NCOA1-201ENST00000288599 A0A1B0GTL3 188 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 A8MWV9 139 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 PPYP01298 95 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 IGHV4-59P01825 116 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 C1QTNF9P0C862 333 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 ZNF329Q86UD4 541 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 KLK9Q9UKQ9 250 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 WDFY3Q8IZQ1 3526 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 IGHV4-4A0A075B6R2 117 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 TCL1BO95988 128 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 SPINK8P0C7L1 97 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 ZNF883P0CG24 379 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 LINC00305Q7Z4B0 112 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 GGNQ86UU5 652 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 VSIRQ9H7M9 311 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 VPS13AQ96RL7 3174 aa3.6□□□□□ -1.83
NCOA1-201ENST00000288599 FRMPD3Q5JV73 1810 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 ANAPC1Q9H1A4 1944 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 SAMD5Q5TGI4 173 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 CNRIP1Q96F85 164 aaPredicted RBP3.59□□□□□ -1.83
NCOA1-201ENST00000288599 UPK3BQ9BT76 320 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 PILRBQ9UKJ0 227 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 MYO9BQ13459 2157 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 H3BQ85 93 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 CRYGCP07315 174 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 CXCL2P19875 107 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 Q0VG73 95 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 RHOHQ15669 191 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 WFDC5Q8TCV5 224 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 ASCC3Q8N3C0 2202 aaKnown RBP3.59□□□□□ -1.83
NCOA1-201ENST00000288599 ZNF106Q9H2Y7 1883 aaKnown RBP3.59□□□□□ -1.83
NCOA1-201ENST00000288599 ICE1Q9Y2F5 2266 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 FAM90A26D6RGX4 464 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 SSBP1Q04837 148 aaKnown RBP3.59□□□□□ -1.83
NCOA1-201ENST00000288599 Q6AWC8 147 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 Q6ZQT7 251 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 ZNRF2Q8NHG8 242 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 GNB1LQ9BYB4 327 aa3.59□□□□□ -1.83
NCOA1-201ENST00000288599 DIDO1Q9BTC0 2240 aaKnown RBP3.59□□□□□ -1.83
NCOA1-201ENST00000288599 TRAV12-2A0A075B6T6 113 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 LOC101059948A0A1B0GTJ6 334 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 C17orf100A8MU93 164 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 MT-ATP8P03928 68 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 EDN2P20800 178 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 TIMP3P35625 211 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF721Q8TF20 911 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 PRRC2BQ5JSZ5 2229 aaKnown RBP3.59□□□□□ -1.84
NCOA1-201ENST00000288599 OOSP1A8MZH6 123 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 P0DMU3 169 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 FAM231AP0DMU4 169 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 FAM231CP0DMU5 169 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 ACYP2P14621 99 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 RPL23P62829 140 aaKnown RBP3.59□□□□□ -1.84
NCOA1-201ENST00000288599 LINC00322Q6ZN03 302 aaPredicted RBP3.59□□□□□ -1.84
NCOA1-201ENST00000288599 SPATA12Q7Z6I5 190 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 CRIPAKQ8N1N5 446 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 TMEM222Q9H0R3 208 aa3.59□□□□□ -1.84
NCOA1-201ENST00000288599 CENPVL3A0A0U1RRI6 287 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 CCL24O00175 119 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 CENPWQ5EE01 88 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 PVRIGQ6DKI7 326 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 C3orf22Q8N5N4 141 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.58□□□□□ -1.84
NCOA1-201ENST00000288599 C18orf12Q96KH6 178 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 IGHV1-24A0A0C4DH33 117 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 LINC01548A6NM66 108 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 IGKV1-5P01602 117 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 IGLV3-27P01718 113 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 MLANAQ16655 118 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 C2orf82Q6UX34 121 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 LY6G5BQ8NDX9 201 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 NUP35Q8NFH5 326 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 LYPD6BQ8NI32 183 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 RPL36A-HNRNPH2H7BZ11 118 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 FGF9P31371 208 aaPredicted RBP3.58□□□□□ -1.84
NCOA1-201ENST00000288599 SPATA31B1PQ5VZV4 182 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 CD300LDQ6UXZ3 194 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 SPRED2Q7Z698 418 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 TET1Q8NFU7 2136 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 IMMP1LQ96LU5 166 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 TRAV23DV6A0A075B6W5 121 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 LY6G6EA0A0G2JKS1 128 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 PRSS46E5RG02 174 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms