RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 RPUSD1Q9UJJ7 312 aaKnown RBP10.27□□□□□ -0.77
HERC6-202ENST00000273960 DLX1P56177 255 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 MBNL2Q5VZF2 373 aaKnown RBP10.26□□□□□ -0.77
HERC6-202ENST00000273960 IFI27L1Q96BM0 104 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 MRPL32Q9BYC8 188 aaKnown RBP10.26□□□□□ -0.77
HERC6-202ENST00000273960 TMEM160Q9NX00 188 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 DSCAMO60469 2012 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 ADGRG4Q8IZF6 3080 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 TRAV17A0A0B4J275 112 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 IQCF6A8MYZ5 107 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 DLL1O00548 723 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 WT1-ASQ06250 92 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 FAM216BQ8N7L0 139 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 MRPL20Q9BYC9 149 aaKnown RBP10.26□□□□□ -0.77
HERC6-202ENST00000273960 PTPRQQ9UMZ3 2332 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 J3QR89 54 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 M0R3E3 92 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 FOXC1Q12948 553 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 FAM90A1Q86YD7 464 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 DDB2Q92466 427 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 SPRY4Q9C004 299 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 TPSG1Q9NRR2 321 aa10.26□□□□□ -0.77
HERC6-202ENST00000273960 CT45A6P0DMU7 189 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 CT45A5P0DMU8 189 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 CT45A7P0DMV0 189 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 ZNF418Q8TF45 676 aaPredicted RBP10.25□□□□□ -0.77
HERC6-202ENST00000273960 A0A096LNJ9 63 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 NPIPB6E9PJ23 425 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 M0R1B8 84 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 TNFRSF1AP19438 455 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 PPP1R35Q8TAP8 253 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 ZNF479Q96JC4 524 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
HERC6-202ENST00000273960 RIGQ13278 110 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 MDS2Q8NDY4 140 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 RBP4P02753 201 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 CKS2P33552 79 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 C9orf106Q8NAJ2 232 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 OR5AN1Q8NGI8 311 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 FAM222BQ8WU58 562 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
HERC6-202ENST00000273960 FAM90A9PA6NNJ1 464 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 GAS8-AS1O95177 125 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 GCSAMQ8N6F7 178 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 OR4X2Q8NGF9 303 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 DEFB104AQ8WTQ1 72 aa10.24□□□□□ -0.77
HERC6-202ENST00000273960 SPANXB1Q9NS25 103 aaPredicted RBP10.24□□□□□ -0.77
HERC6-202ENST00000273960 TCRBV4S1A1TA0A5B7 111 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 MC5RP33032 325 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 KIR2DL2P43627 348 aaPredicted RBP10.23□□□□□ -0.77
HERC6-202ENST00000273960 KIR2DS2P43631 304 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 C17orf58Q2M2W7 97 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 C2orf83Q53S99 150 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 LYZL1Q6UWQ5 148 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 PTH2Q96A98 100 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 C8orf49Q96NF6 230 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 RPRMLQ8N4K4 120 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 SYT8Q8NBV8 401 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 OR1L8Q8NGR8 309 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 FOXC2Q99958 501 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 CECR9P0C854 216 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 CCL3L1P16619 93 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 ZCCHC24Q8N2G6 241 aaKnown RBP10.23□□□□□ -0.77
HERC6-202ENST00000273960 OR9G4Q8NGQ1 327 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 MLST8Q9BVC4 326 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 PRSS22Q9GZN4 317 aa10.23□□□□□ -0.77
HERC6-202ENST00000273960 SPG11Q96JI7 2443 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 TWIST1Q15672 202 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 Q86TA4 180 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 PROCRQ9UNN8 238 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 IGHV3OR16-8A0A075B7F1 116 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 NDUFS7O75251 213 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 NPYP01303 97 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 SPINK8P0C7L1 97 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 GATA1P15976 413 aaPredicted RBP10.22□□□□□ -0.77
HERC6-202ENST00000273960 IGFL4Q6B9Z1 124 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 HIST1H4GQ99525 98 aa10.22□□□□□ -0.77
HERC6-202ENST00000273960 LOC107984156A0A0G2JMH3 177 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 C16orf97H3BN30 126 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 SMIM17P0DL12 118 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 GAGE13Q4V321 117 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 ZC2HC1BQ5TFG8 222 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 ARL17AQ8IVW1 177 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 HBDP02042 147 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 MT-ATP8P03928 68 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 RITA1Q96K30 269 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 KLK15Q9H2R5 256 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 MSRB1Q9NZV6 116 aa10.21□□□□□ -0.77
HERC6-202ENST00000273960 PRRG2O14669 202 aa10.21□□□□□ -0.78
HERC6-202ENST00000273960 APOMO95445 188 aa10.21□□□□□ -0.78
HERC6-202ENST00000273960 FMC1Q96HJ9 113 aa10.21□□□□□ -0.78
HERC6-202ENST00000273960 RALYQ9UKM9 306 aaKnown RBP10.21□□□□□ -0.78
HERC6-202ENST00000273960 APOBEC3AP31941 199 aaPredicted RBP10.2□□□□□ -0.78
HERC6-202ENST00000273960 LEPP41159 167 aa10.2□□□□□ -0.78
HERC6-202ENST00000273960 TMEM75Q8N9X5 138 aa10.2□□□□□ -0.78
HERC6-202ENST00000273960 ZZEF1O43149 2961 aa10.2□□□□□ -0.78
HERC6-202ENST00000273960 TRBV25-1A0A075B6N4 114 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms