RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 RBPJQ06330 500 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 NDFIP1Q9BT67 221 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 AKAP6Q13023 2319 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 HAX1O00165 279 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 IGHV3-23P01764 117 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 APOBEC3AP31941 199 aaPredicted RBP17.47■□□□□ 0.39
CDR2-201ENST00000268383 TCTAP57738 103 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 KLRD1Q13241 179 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 SIGLEC15Q6ZMC9 328 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 ORAOV1Q8WV07 137 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 SOX21Q9Y651 276 aaPredicted RBP17.47■□□□□ 0.39
CDR2-201ENST00000268383 PSG8Q9UQ74 426 aa17.46■□□□□ 0.39
CDR2-201ENST00000268383 SPTBN1Q01082 2364 aaKnown RBP17.46■□□□□ 0.39
CDR2-201ENST00000268383 A0A1B0GUT8 65 aa17.46■□□□□ 0.39
CDR2-201ENST00000268383 NUDT3O95989 172 aa17.46■□□□□ 0.39
CDR2-201ENST00000268383 ARF6P62330 175 aa17.46■□□□□ 0.39
CDR2-201ENST00000268383 ZNF491Q8N8L2 437 aa17.46■□□□□ 0.39
CDR2-201ENST00000268383 TMEM14CQ9P0S9 112 aa17.46■□□□□ 0.39
CDR2-201ENST00000268383 HLA-DRB1P01911 266 aa17.45■□□□□ 0.38
CDR2-201ENST00000268383 BPIFA4PQ86YQ2 179 aa17.45■□□□□ 0.38
CDR2-201ENST00000268383 NEU4Q8WWR8 484 aaPredicted RBP17.45■□□□□ 0.38
CDR2-201ENST00000268383 SHANK2-AS3Q9BTD1 123 aa17.45■□□□□ 0.38
CDR2-201ENST00000268383 LOC389332A0A1B0GUA5 103 aa17.45■□□□□ 0.38
CDR2-201ENST00000268383 NCR2O95944 276 aa17.45■□□□□ 0.38
CDR2-201ENST00000268383 HOXB4P17483 251 aaPredicted RBP17.45■□□□□ 0.38
CDR2-201ENST00000268383 ZNF738Q8NE65 137 aa17.45■□□□□ 0.38
CDR2-201ENST00000268383 IGHV3OR16-8A0A075B7F1 116 aa17.44■□□□□ 0.38
CDR2-201ENST00000268383 LOXL1Q08397 574 aaPredicted RBP17.44■□□□□ 0.38
CDR2-201ENST00000268383 TNFRSF14Q92956 283 aa17.44■□□□□ 0.38
CDR2-201ENST00000268383 RNF125Q96EQ8 232 aa17.44■□□□□ 0.38
CDR2-201ENST00000268383 SCNM1Q9BWG6 230 aa17.44■□□□□ 0.38
CDR2-201ENST00000268383 MAP1LC3CQ9BXW4 147 aa17.44■□□□□ 0.38
CDR2-201ENST00000268383 H3BRN7 92 aa17.43■□□□□ 0.38
CDR2-201ENST00000268383 IGFL4Q6B9Z1 124 aa17.43■□□□□ 0.38
CDR2-201ENST00000268383 LIPFP07098 398 aa17.43■□□□□ 0.38
CDR2-201ENST00000268383 CD3EP07766 207 aa17.43■□□□□ 0.38
CDR2-201ENST00000268383 C16orf54Q6UWD8 224 aa17.43■□□□□ 0.38
CDR2-201ENST00000268383 A0A087X0K7 114 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 SERTM2A0A1B0GWG4 89 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 TMEM213A2RRL7 107 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 HES1Q14469 280 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 UBE2V1Q13404 147 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 FAM162BQ5T6X4 162 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 ZNF414Q96IQ9 312 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 TMEM191AQ9H0A3 160 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 ST20Q9HBF5 79 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 COL6A6A6NMZ7 2263 aa17.42■□□□□ 0.38
CDR2-201ENST00000268383 FAM231BA6NCW3 169 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 FAM90A27PA6NNH2 459 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 B9A039 149 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 LY6LH3BQJ8 138 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 PSG3Q16557 428 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 OR5AL1P0C617 328 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 SLC25A34Q6PIV7 304 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 LOC105371242A0A075B767 164 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 IGHV3-35A0A0C4DH35 117 aa17.41■□□□□ 0.38
CDR2-201ENST00000268383 IFI27P40305 119 aaPredicted RBP17.41■□□□□ 0.38
CDR2-201ENST00000268383 PAX2Q02962 417 aa17.4■□□□□ 0.38
CDR2-201ENST00000268383 AP5S1Q9NUS5 200 aa17.4■□□□□ 0.38
CDR2-201ENST00000268383 IGF2RP11717 2491 aa17.4■□□□□ 0.38
CDR2-201ENST00000268383 MRPS12O15235 138 aaKnown RBP17.4■□□□□ 0.38
CDR2-201ENST00000268383 ZNF672Q499Z4 452 aaPredicted RBP17.4■□□□□ 0.38
CDR2-201ENST00000268383 TMEM75Q8N9X5 138 aa17.4■□□□□ 0.38
CDR2-201ENST00000268383 PRSS3P2Q8NHM4 247 aa17.4■□□□□ 0.38
CDR2-201ENST00000268383 IGKV2-40A0A087WW87 121 aaPredicted RBP17.39■□□□□ 0.37
CDR2-201ENST00000268383 CBY3A6NI87 242 aa17.39■□□□□ 0.37
CDR2-201ENST00000268383 IGKV2D-40P01614 121 aaPredicted RBP17.39■□□□□ 0.37
CDR2-201ENST00000268383 VAMP3Q15836 100 aa17.39■□□□□ 0.37
CDR2-201ENST00000268383 SCRT2Q9NQ03 307 aa17.39■□□□□ 0.37
CDR2-201ENST00000268383 HSBP1L1C9JCN9 74 aa17.39■□□□□ 0.37
CDR2-201ENST00000268383 RIGQ13278 110 aa17.39■□□□□ 0.37
CDR2-201ENST00000268383 GNG7O60262 68 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 BVES-AS1Q5T3Y7 98 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 LYZL1Q6UWQ5 148 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 AMN1Q8IY45 258 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 C1RLQ9NZP8 487 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 OR2T8A6NH00 312 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 D6R8Y8 96 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 NBR2O15453 112 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 TCF15Q12870 199 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 OR8A1Q8NGG7 326 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 Q8TAT8 98 aa17.38■□□□□ 0.37
CDR2-201ENST00000268383 CELSR1Q9NYQ6 3014 aa17.37■□□□□ 0.37
CDR2-201ENST00000268383 HLA-DMBP28068 263 aa17.37■□□□□ 0.37
CDR2-201ENST00000268383 NDPQ00604 133 aa17.37■□□□□ 0.37
CDR2-201ENST00000268383 FA2HQ7L5A8 372 aa17.37■□□□□ 0.37
CDR2-201ENST00000268383 SMKR1H3BMG3 65 aa17.36■□□□□ 0.37
CDR2-201ENST00000268383 TAX1BP3O14907 124 aa17.36■□□□□ 0.37
CDR2-201ENST00000268383 PET117Q6UWS5 81 aa17.36■□□□□ 0.37
CDR2-201ENST00000268383 ZNF747Q9BV97 191 aa17.36■□□□□ 0.37
CDR2-201ENST00000268383 HSPB8Q9UJY1 196 aa17.36■□□□□ 0.37
CDR2-201ENST00000268383 FANCD2OSQ96PS1 177 aa17.36■□□□□ 0.37
CDR2-201ENST00000268383 A0A096LNJ9 63 aa17.35■□□□□ 0.37
CDR2-201ENST00000268383 K7EQM0 130 aa17.35■□□□□ 0.37
CDR2-201ENST00000268383 CDSNQ15517 529 aa17.35■□□□□ 0.37
CDR2-201ENST00000268383 CFHR4Q92496 578 aa17.35■□□□□ 0.37
CDR2-201ENST00000268383 SELENOKQ9Y6D0 94 aa17.35■□□□□ 0.37
CDR2-201ENST00000268383 LINC01545Q5VT33 79 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 OR4C5Q8NGB2 326 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 NCBP2LA6PVI3 153 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms