RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CHTOPQ9Y3Y2 248 aaKnown RBP12.21□□□□□ -0.45
CASC3-201ENST00000264645 MED12LQ86YW9 2145 aa12.21□□□□□ -0.46
CASC3-201ENST00000264645 IGHV4-39P01824 125 aa12.21□□□□□ -0.46
CASC3-201ENST00000264645 CD3EP07766 207 aa12.21□□□□□ -0.46
CASC3-201ENST00000264645 TMEM133Q9H2Q1 129 aa12.21□□□□□ -0.46
CASC3-201ENST00000264645 RNF114Q9Y508 228 aa12.21□□□□□ -0.46
CASC3-201ENST00000264645 CT83Q5H943 113 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 METTL26Q96S19 204 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 WIPF2Q8TF74 440 aaPredicted RBP12.2□□□□□ -0.46
CASC3-201ENST00000264645 TRGV9Q99603 122 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 SPRR3Q9UBC9 169 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 DSCAML1Q8TD84 2053 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 C10orf126Q8N4M7 172 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 TMEM167AQ8TBQ9 72 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 SIGLEC8Q9NYZ4 499 aa12.2□□□□□ -0.46
CASC3-201ENST00000264645 EML6Q6ZMW3 1958 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 TMEM8BA6NDV4 472 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 LGALS9BQ3B8N2 356 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 LGALS9CQ6DKI2 356 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 MRAP2Q96G30 205 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 ZNF492Q9P255 531 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 F8W1H4 67 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 SH2D1AO60880 128 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 C1orf122Q6ZSJ8 110 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 DKK2Q9UBU2 259 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 CTRLP40313 264 aa12.19□□□□□ -0.46
CASC3-201ENST00000264645 FAM90A27PA6NNH2 459 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 F2RL2O00254 374 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 IGLV2-14P01704 120 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 TMPRSS3P57727 454 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 C1orf162Q8NEQ5 155 aaPredicted RBP12.18□□□□□ -0.46
CASC3-201ENST00000264645 SCRT2Q9NQ03 307 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 KLK10O43240 276 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 IGKV3-15P01624 115 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 NPFFR1Q9GZQ6 430 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 DYSFO75923 2080 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 C2orf70A6NJV1 201 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 LAGE3Q14657 143 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 FAM104BQ5XKR9 115 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 MORN5Q5VZ52 161 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 CCDC144NLQ6NUI1 221 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 FDCSPQ8NFU4 85 aa12.18□□□□□ -0.46
CASC3-201ENST00000264645 ADIPOQQ15848 244 aa12.17□□□□□ -0.46
CASC3-201ENST00000264645 KLRB1Q12918 225 aa12.17□□□□□ -0.46
CASC3-201ENST00000264645 PVRIGQ6DKI7 326 aa12.17□□□□□ -0.46
CASC3-201ENST00000264645 FXYD5Q96DB9 178 aa12.17□□□□□ -0.46
CASC3-201ENST00000264645 SRSF8Q9BRL6 282 aaKnown RBP12.17□□□□□ -0.46
CASC3-201ENST00000264645 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
CASC3-201ENST00000264645 A0A1W2PPI3 338 aa12.17□□□□□ -0.46
CASC3-201ENST00000264645 K7EMI3 77 aa12.17□□□□□ -0.46
CASC3-201ENST00000264645 PCDH15Q96QU1 1955 aa12.16□□□□□ -0.46
CASC3-201ENST00000264645 C15orf65H3BRN8 121 aa12.16□□□□□ -0.46
CASC3-201ENST00000264645 HAX1O00165 279 aa12.16□□□□□ -0.46
CASC3-201ENST00000264645 SS18L1O75177 396 aaPredicted RBP12.16□□□□□ -0.46
CASC3-201ENST00000264645 TRIP6Q15654 476 aaKnown RBP12.16□□□□□ -0.46
CASC3-201ENST00000264645 TMEM95Q3KNT9 176 aa12.16□□□□□ -0.46
CASC3-201ENST00000264645 ZNF71Q9NQZ8 489 aaPredicted RBP12.16□□□□□ -0.46
CASC3-201ENST00000264645 NPIPB6E9PJ23 425 aa12.16□□□□□ -0.46
CASC3-201ENST00000264645 TTTY13Q9BZ97 58 aa12.16□□□□□ -0.46
CASC3-201ENST00000264645 A0A0C4DFX4 3053 aa12.16□□□□□ -0.46
CASC3-201ENST00000264645 WT1-ASQ06250 92 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 WFDC2Q14508 124 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 DEFB124Q8NES8 71 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 KMT2EQ8IZD2 1858 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 SRRM4A7MD48 611 aaKnown RBP12.15□□□□□ -0.46
CASC3-201ENST00000264645 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 SSBP2P81877 361 aaPredicted RBP12.15□□□□□ -0.46
CASC3-201ENST00000264645 MRPL51Q4U2R6 128 aaKnown RBP12.15□□□□□ -0.46
CASC3-201ENST00000264645 ADAMTS9Q9P2N4 1935 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 G3V4G9 280 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 ZNF562Q6V9R5 426 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 Q6ZR03 302 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 UTRNP46939 3433 aa12.15□□□□□ -0.46
CASC3-201ENST00000264645 LINC01549A6NIU2 74 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 IGHV1-46P01743 117 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 LINC01545Q5VT33 79 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 NPYP01303 97 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 ZNF56Q15929 161 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 NUP210Q8TEM1 1887 aaPredicted RBP12.14□□□□□ -0.47
CASC3-201ENST00000264645 IGHV3-64A0A075B6Q5 118 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 TMEM155Q4W5P6 130 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 ORMDL2Q53FV1 153 aa12.14□□□□□ -0.47
CASC3-201ENST00000264645 ZNF48Q96MX3 618 aaPredicted RBP12.14□□□□□ -0.47
CASC3-201ENST00000264645 PLNP26678 52 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 FAM120AOSQ5T036 256 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 DUX4L9Q6RFH8 374 aaPredicted RBP12.13□□□□□ -0.47
CASC3-201ENST00000264645 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 C8orf49Q96NF6 230 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 SPATA12Q7Z6I5 190 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 C17orf100A8MU93 164 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 NDUFS7O75251 213 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 ASIPP42127 132 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 MRPL35Q9NZE8 188 aaKnown RBP12.13□□□□□ -0.47
CASC3-201ENST00000264645 TNRC6AQ8NDV7 1962 aaKnown RBP12.13□□□□□ -0.47
CASC3-201ENST00000264645 C9JAW5 83 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 CRXO43186 299 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms