RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 RPL13AP40429 203 aaKnown RBP13.09□□□□□ -0.31
CTCF-201ENST00000264010 C1orf122Q6ZSJ8 110 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 TRGV9Q99603 122 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 ST20Q9HBF5 79 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 AP5S1Q9NUS5 200 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 NBR2O15453 112 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 AAMDCQ9H7C9 122 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 TPSG1Q9NRR2 321 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 LY6HO94772 140 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 DLX1P56177 255 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 SAMD5Q5TGI4 173 aa13.09□□□□□ -0.31
CTCF-201ENST00000264010 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
CTCF-201ENST00000264010 C22orf46C9J442 243 aa13.08□□□□□ -0.31
CTCF-201ENST00000264010 GRNP28799 593 aaKnown RBP13.08□□□□□ -0.31
CTCF-201ENST00000264010 PSG3Q16557 428 aa13.08□□□□□ -0.31
CTCF-201ENST00000264010 ZNF48Q96MX3 618 aaPredicted RBP13.08□□□□□ -0.31
CTCF-201ENST00000264010 DSCAMO60469 2012 aa13.08□□□□□ -0.32
CTCF-201ENST00000264010 IGHV2-70DA0A0C4DH43 119 aa13.08□□□□□ -0.32
CTCF-201ENST00000264010 SMIM20Q8N5G0 67 aa13.08□□□□□ -0.32
CTCF-201ENST00000264010 WNK1Q9H4A3 2382 aa13.08□□□□□ -0.32
CTCF-201ENST00000264010 B5MCH6 92 aa13.08□□□□□ -0.32
CTCF-201ENST00000264010 ADAMTSL5Q6ZMM2 481 aa13.08□□□□□ -0.32
CTCF-201ENST00000264010 CEP295Q9C0D2 2601 aa13.08□□□□□ -0.32
CTCF-201ENST00000264010 BOD1L2Q8IYS8 172 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 TEX29Q8N6K0 151 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 TP73-AS1Q9UF72 201 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 BOD1L1Q8NFC6 3051 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 ZNF502Q8TBZ5 544 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 CUL9Q8IWT3 2517 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 MFAP4P55083 255 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 KIR3DS1Q14943 382 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 CNTFRP26992 372 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 HIST1H1AQ02539 215 aaPredicted RBP13.07□□□□□ -0.32
CTCF-201ENST00000264010 TCF24Q7RTU0 167 aa13.07□□□□□ -0.32
CTCF-201ENST00000264010 LAMA5O15230 3695 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 PTPRBP23467 1997 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 A0A1W2PS18 150 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 INS-IGF2F8WCM5 200 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 SNCGO76070 127 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 APOMO95445 188 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 FBXL19-AS1Q494R0 122 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 KLK15Q9H2R5 256 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 A8MWL6 223 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 FAM106CPP0CH98 169 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 EPDR1Q9UM22 224 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 FAM181BA6NEQ2 426 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 M0R1W7 72 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 CD24P25063 80 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 Q8N7P7 452 aa13.06□□□□□ -0.32
CTCF-201ENST00000264010 LY6DQ14210 128 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 C8orf46Q8TAG6 207 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 IGKV1OR2-108A0A075B7D4 117 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 APOHP02749 345 aaPredicted RBP13.05□□□□□ -0.32
CTCF-201ENST00000264010 PPIFP30405 207 aaKnown RBP13.05□□□□□ -0.32
CTCF-201ENST00000264010 CRYBA4P53673 196 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 THAP8Q8NA92 274 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 TMUB1Q9BVT8 246 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 MRPS16Q9Y3D3 137 aaKnown RBP13.05□□□□□ -0.32
CTCF-201ENST00000264010 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 TEX43Q6ZNM6 134 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 GRAMD2BQ96HH9 432 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 RCHY1Q96PM5 261 aa13.05□□□□□ -0.32
CTCF-201ENST00000264010 MRPL16Q9NX20 251 aaKnown RBP13.05□□□□□ -0.32
CTCF-201ENST00000264010 C2CD3Q4AC94 2353 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 HIGD1CA8MV81 97 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 SLC25A2Q9BXI2 301 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 GNG5P63218 68 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 SLAQ13239 276 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 TMEM160Q9NX00 188 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 IGLV2-23P01705 113 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 FCGR2BP31994 310 aaPredicted RBP13.04□□□□□ -0.32
CTCF-201ENST00000264010 KLRD1Q13241 179 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 PRNTQ86SH4 94 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 TSKUQ8WUA8 353 aa13.04□□□□□ -0.32
CTCF-201ENST00000264010 IGLC7A0M8Q6 106 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 IL4P05112 153 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 PRTN3P24158 256 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 DLX6P56179 175 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 GPR82Q96P67 336 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 ARPC1AQ92747 370 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 Q9H3A6 140 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 TRAV8-2A0A0B4J237 113 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 GNB1LQ9BYB4 327 aa13.03□□□□□ -0.32
CTCF-201ENST00000264010 CHTOPQ9Y3Y2 248 aaKnown RBP13.03□□□□□ -0.32
CTCF-201ENST00000264010 TEX48A0A1B0GUV7 120 aa13.02□□□□□ -0.32
CTCF-201ENST00000264010 IZUMO1RA6ND01 250 aa13.02□□□□□ -0.32
CTCF-201ENST00000264010 E7EUB6 86 aa13.02□□□□□ -0.32
CTCF-201ENST00000264010 CD5LO43866 347 aa13.02□□□□□ -0.32
CTCF-201ENST00000264010 PRSS57Q6UWY2 283 aa13.02□□□□□ -0.32
CTCF-201ENST00000264010 UFC1Q9Y3C8 167 aa13.02□□□□□ -0.32
CTCF-201ENST00000264010 TRBV20OR9-2A0A075B6H5 130 aa13.02□□□□□ -0.33
CTCF-201ENST00000264010 SSBP2P81877 361 aaPredicted RBP13.02□□□□□ -0.33
CTCF-201ENST00000264010 ZNF414Q96IQ9 312 aa13.02□□□□□ -0.33
CTCF-201ENST00000264010 RITA1Q96K30 269 aa13.02□□□□□ -0.33
CTCF-201ENST00000264010 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.33
CTCF-201ENST00000264010 IGLV1-47P01700 117 aa13.02□□□□□ -0.33
CTCF-201ENST00000264010 CACNG7P62955 275 aa13.02□□□□□ -0.33
CTCF-201ENST00000264010 PVRIGQ6DKI7 326 aa13.02□□□□□ -0.33
CTCF-201ENST00000264010 MRPL52Q86TS9 123 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms