RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 OR4X2Q8NGF9 303 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 GPR82Q96P67 336 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 IL36BQ9NZH7 164 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 UNC79Q9P2D8 2635 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 IGHV3OR16-13A0A075B7E8 117 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 TRAV8-1A0A0A6YYK1 113 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 IGHV3-74A0A0B4J1X5 117 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 S100A9P06702 114 aaKnown RBP12.17□□□□□ -0.46
VPS26A-201ENST00000263559 IBA57Q5T440 356 aaKnown RBP12.17□□□□□ -0.46
VPS26A-201ENST00000263559 C10orf99Q6UWK7 81 aa12.17□□□□□ -0.46
VPS26A-201ENST00000263559 A0A0G2JLM5 398 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 M0R3E3 92 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 IGHG4P01861 327 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 METTL26Q96S19 204 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 PRSS22Q9GZN4 317 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 IGHV3-49A0A0A0MS15 119 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 LTAP01374 205 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 IGLV2-11P01706 119 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 PSMB8P28062 276 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 DUX5Q96PT3 197 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 MLST8Q9BVC4 326 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 AAMDCQ9H7C9 122 aa12.16□□□□□ -0.46
VPS26A-201ENST00000263559 PSG9Q00887 426 aa12.15□□□□□ -0.46
VPS26A-201ENST00000263559 SAV1Q9H4B6 383 aaPredicted RBP12.15□□□□□ -0.46
VPS26A-201ENST00000263559 ZNF702PQ9H963 129 aa12.15□□□□□ -0.46
VPS26A-201ENST00000263559 BIN3Q9NQY0 253 aa12.15□□□□□ -0.46
VPS26A-201ENST00000263559 PRR27Q6MZM9 219 aa12.15□□□□□ -0.46
VPS26A-201ENST00000263559 UNQ9165/PRO28630Q6UXU0 137 aa12.15□□□□□ -0.46
VPS26A-201ENST00000263559 U3KQE9 123 aa12.15□□□□□ -0.46
VPS26A-201ENST00000263559 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 SNRPEP62304 92 aaKnown RBP12.14□□□□□ -0.47
VPS26A-201ENST00000263559 RPEL1Q2QD12 228 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 TMEM190Q8WZ59 177 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 SMIM12Q96EX1 92 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 SERTAD4Q9NUC0 356 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 DIRC3C9JPN6 131 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 NDUFA4O00483 81 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 TYMSP04818 313 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 KRTAP1-1Q07627 177 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 ZNF785A8K8V0 405 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 PHOX2AO14813 284 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 S100A6P06703 90 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 C1orf194Q5T5A4 169 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 IGFL4Q6B9Z1 124 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 FAM231DQ6ZW35 169 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 Q86TA4 180 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 NUDT10Q8NFP7 164 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 FRZBQ92765 325 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 NUDT11Q96G61 164 aa12.14□□□□□ -0.47
VPS26A-201ENST00000263559 ZNF705GA8MUZ8 300 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-201ENST00000263559 Q71RC1 249 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-201ENST00000263559 ZNF253O75346 499 aa12.13□□□□□ -0.47
VPS26A-201ENST00000263559 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
VPS26A-201ENST00000263559 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
VPS26A-201ENST00000263559 ZNF331Q9NQX6 463 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-201ENST00000263559 A0A087X0K7 114 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 C5orf52A6NGY3 159 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BKO60814 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 CA1P00915 261 aaPredicted RBP12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BJP06899 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BOP23527 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HLA-DMBP28068 263 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BBP33778 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BDP58876 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BCP62807 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST2H2BEQ16778 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.12□□□□□ -0.47
VPS26A-201ENST00000263559 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BHQ93079 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BNQ99877 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 HIST1H2BMQ99879 126 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 AKAP9Q99996 3911 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
VPS26A-201ENST00000263559 TMEM89A2RUT3 159 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 K7EQM0 130 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 PSG3Q16557 428 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 TMEM183AQ8IXX5 376 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 BTF3L4Q96K17 158 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 ASCL2Q99929 193 aa12.12□□□□□ -0.47
VPS26A-201ENST00000263559 TRBV6-1A0A0K0K1D8 114 aa12.11□□□□□ -0.47
VPS26A-201ENST00000263559 GATCO43716 136 aaKnown RBP12.11□□□□□ -0.47
VPS26A-201ENST00000263559 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
VPS26A-201ENST00000263559 CSN1S1P47710 185 aa12.11□□□□□ -0.47
VPS26A-201ENST00000263559 FAM209BQ5JX69 171 aa12.11□□□□□ -0.47
VPS26A-201ENST00000263559 PEF1Q9UBV8 284 aaKnown RBP12.11□□□□□ -0.47
VPS26A-201ENST00000263559 PSG8Q9UQ74 426 aa12.11□□□□□ -0.47
VPS26A-201ENST00000263559 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
VPS26A-201ENST00000263559 TRAV9-1A0A075B6T8 112 aa12.1□□□□□ -0.47
VPS26A-201ENST00000263559 CD5LO43866 347 aa12.1□□□□□ -0.47
VPS26A-201ENST00000263559 TCL1AP56279 114 aa12.1□□□□□ -0.47
VPS26A-201ENST00000263559 SMIM27A0A1W2PRY6 76 aa12.1□□□□□ -0.47
VPS26A-201ENST00000263559 ZNF705FA8MVS1 300 aaPredicted RBP12.1□□□□□ -0.47
VPS26A-201ENST00000263559 SLC35B1P78383 322 aa12.1□□□□□ -0.47
VPS26A-201ENST00000263559 C16orf54Q6UWD8 224 aa12.1□□□□□ -0.47
VPS26A-201ENST00000263559 YAE1D1Q9NRH1 226 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms