RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 HELTA6NFD8 242 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 CORTO00230 105 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 ZNF562Q6V9R5 426 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 FANCD2OSQ96PS1 177 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 C19orf24Q9BVV8 132 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 LINC00527Q9UJ94 153 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 ZNF253O75346 499 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 FAM106CPP0CH98 169 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 IGHV4-38-2P0DP08 117 aa10.68□□□□□ -0.7
VMP1-201ENST00000262291 EGR2P11161 476 aaPredicted RBP10.68□□□□□ -0.7
VMP1-201ENST00000262291 ESDP10768 282 aa10.67□□□□□ -0.7
VMP1-201ENST00000262291 OR2T8A6NH00 312 aa10.67□□□□□ -0.7
VMP1-201ENST00000262291 G3V318 75 aa10.67□□□□□ -0.7
VMP1-201ENST00000262291 MGST1P10620 155 aaKnown RBP10.67□□□□□ -0.7
VMP1-201ENST00000262291 OR10G8Q8NGN5 311 aa10.67□□□□□ -0.7
VMP1-201ENST00000262291 TMUB1Q9BVT8 246 aa10.67□□□□□ -0.7
VMP1-201ENST00000262291 RNASE7Q9H1E1 156 aaKnown RBP10.67□□□□□ -0.7
VMP1-201ENST00000262291 UBR5O95071 2799 aaPredicted RBP10.67□□□□□ -0.7
VMP1-201ENST00000262291 A0A1W2PS18 150 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 GNG4P50150 75 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 Q56UQ5 140 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 C11orf52Q96A22 123 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 TXNDC17Q9BRA2 123 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 LY6EQ16553 131 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 S100A7AQ86SG5 101 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 ZNF329Q86UD4 541 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 OR2D3Q8NGH3 330 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 NAT8BQ9UHF3 227 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 HIGD1AQ9Y241 93 aa10.66□□□□□ -0.7
VMP1-201ENST00000262291 TRAV30A0A087WSZ9 112 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 OOSP1A8MZH6 123 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 ATP6V0E1O15342 81 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 A0A1W2PRE2 83 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 PGPA6NDG6 321 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 GNG7O60262 68 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 SAP30O75446 220 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 GOSR1O95249 250 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 IL4P05112 153 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 CD99P14209 185 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 KRTAP10-9P60411 292 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 PAX8Q06710 450 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 EBI3Q14213 229 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 OR8I2Q8N0Y5 310 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 C17orf77Q96MU5 243 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 ASCL2Q99929 193 aa10.65□□□□□ -0.7
VMP1-201ENST00000262291 SLC25A39Q9BZJ4 359 aaPredicted RBP10.65□□□□□ -0.7
VMP1-201ENST00000262291 CHTOPQ9Y3Y2 248 aaKnown RBP10.65□□□□□ -0.7
VMP1-201ENST00000262291 IGLV11-55A0A075B6I3 123 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 TCL1AP56279 114 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 MPV17L2Q567V2 206 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 KLHDC1Q8N7A1 406 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 MEGF9Q9H1U4 602 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 CIDEAO60543 219 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 SLC25A5P05141 298 aaKnown RBP10.64□□□□□ -0.71
VMP1-201ENST00000262291 NBEAP1P0C6P0 100 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 NIT1Q86X76 327 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 KCNS1Q96KK3 526 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 C7orf69Q9H7B7 122 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 VWC2LB2RUY7 222 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 Q0VG73 95 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 PRR31Q5SQ13 230 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 PRR27Q6MZM9 219 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 Q71RC1 249 aaPredicted RBP10.64□□□□□ -0.71
VMP1-201ENST00000262291 EXOC3-AS1Q8N2X6 119 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 OR4F17Q8NGA8 305 aa10.64□□□□□ -0.71
VMP1-201ENST00000262291 MRPS16Q9Y3D3 137 aaKnown RBP10.64□□□□□ -0.71
VMP1-201ENST00000262291 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 F8W735 103 aaPredicted RBP10.63□□□□□ -0.71
VMP1-201ENST00000262291 ISLRO14498 428 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 CA1P00915 261 aaPredicted RBP10.63□□□□□ -0.71
VMP1-201ENST00000262291 AVPP01185 164 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 GP9P14770 177 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 COX6B1P14854 86 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 SRIP30626 198 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 FCGR2BP31994 310 aaPredicted RBP10.63□□□□□ -0.71
VMP1-201ENST00000262291 C16orf54Q6UWD8 224 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 PEX7O00628 323 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 ZNF324O75467 553 aaPredicted RBP10.63□□□□□ -0.71
VMP1-201ENST00000262291 IGLL1P15814 213 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 Q5PR19 223 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 TTC9CQ8N5M4 171 aa10.63□□□□□ -0.71
VMP1-201ENST00000262291 SRSF8Q9BRL6 282 aaKnown RBP10.63□□□□□ -0.71
VMP1-201ENST00000262291 NPIPB5A8MRT5 1133 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 ZNF491Q8N8L2 437 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 BORCS7Q96B45 105 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 SERTAD4Q9NUC0 356 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 HIF1ANQ9NWT6 349 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 C21orf62Q9NYP8 219 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 IL36BQ9NZH7 164 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 C1RLQ9NZP8 487 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 CHRDL1Q9BU40 450 aa10.62□□□□□ -0.71
VMP1-201ENST00000262291 MFAP4P55083 255 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 MRPL54Q6P161 138 aaKnown RBP10.61□□□□□ -0.71
VMP1-201ENST00000262291 RNF125Q96EQ8 232 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 IGF2BP2-AS1Q96M15 143 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms