RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 MRPS12O15235 138 aaKnown RBP13.83□□□□□ -0.2
CYSTM1-201ENST00000261811 TRPT1Q86TN4 253 aaKnown RBP13.83□□□□□ -0.2
CYSTM1-201ENST00000261811 SAV1Q9H4B6 383 aaPredicted RBP13.83□□□□□ -0.2
CYSTM1-201ENST00000261811 hCG_2014768A0A024R1R8 64 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 IGLC2P0DOY2 106 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 HIST1H1EP10412 219 aaKnown RBP13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 HLA-DRB4P13762 266 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 ATP6V0CP27449 155 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 KHDC3LQ587J8 217 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 RPL7L1Q6DKI1 246 aaKnown RBP13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 AKAP14Q86UN6 197 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 TCTE3Q8IZS6 198 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 ZNF738Q8NE65 137 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 OR2G3Q8NGZ4 309 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 ARPC5LQ9BPX5 153 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 OR51M1Q9H341 326 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 TP53TG1Q9Y2A0 90 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 HLA-DRB4X5D2U9 266 aa13.82□□□□□ -0.2
CYSTM1-201ENST00000261811 KANTRA0A1W2PQU2 76 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 OR7C2O60412 319 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 ZNF253O75346 499 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 DUSP14O95147 198 aaKnown RBP13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 PSG9Q00887 426 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 PDE6HQ13956 83 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 MIR17HGQ75NE6 70 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 KCNRGQ8N5I3 272 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 OR10G4Q8NGN3 311 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 OR10G9Q8NGN4 311 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 OR10G7Q8NGN6 311 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 ST6GAL2Q96JF0 529 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 PAXXQ9BUH6 204 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 C1QTNF4Q9BXJ3 329 aa13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 ZNF331Q9NQX6 463 aaPredicted RBP13.81□□□□□ -0.2
CYSTM1-201ENST00000261811 H3BMM0 161 aa13.8□□□□□ -0.2
CYSTM1-201ENST00000261811 CA1P00915 261 aaPredicted RBP13.8□□□□□ -0.2
CYSTM1-201ENST00000261811 EIF5AP63241 154 aaKnown RBP13.8□□□□□ -0.2
CYSTM1-201ENST00000261811 PSG3Q16557 428 aa13.8□□□□□ -0.2
CYSTM1-201ENST00000261811 OR4B1Q8NGF8 309 aa13.8□□□□□ -0.2
CYSTM1-201ENST00000261811 C17orf77Q96MU5 243 aa13.8□□□□□ -0.2
CYSTM1-201ENST00000261811 SLC25A2Q9BXI2 301 aa13.8□□□□□ -0.2
CYSTM1-201ENST00000261811 AAMDCQ9H7C9 122 aa13.8□□□□□ -0.2
CYSTM1-201ENST00000261811 TRAV8-2A0A0B4J237 113 aa13.79□□□□□ -0.2
CYSTM1-201ENST00000261811 SPRY2O43597 315 aa13.79□□□□□ -0.2
CYSTM1-201ENST00000261811 PFDN1O60925 122 aa13.79□□□□□ -0.2
CYSTM1-201ENST00000261811 DEFB135Q30KP9 77 aa13.79□□□□□ -0.2
CYSTM1-201ENST00000261811 RNF182Q8N6D2 247 aa13.79□□□□□ -0.2
CYSTM1-201ENST00000261811 CLUHP3Q96NS8 147 aa13.79□□□□□ -0.2
CYSTM1-201ENST00000261811 NBEAL2Q6ZNJ1 2754 aa13.79□□□□□ -0.2
CYSTM1-201ENST00000261811 TRBV19A0A075B6N1 114 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 A0A0J9YX75 114 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 H3BQ15 152 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 SNRPCP09234 159 aaKnown RBP13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 NBEAP1P0C6P0 100 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 PYYP10082 97 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 IGFL4Q6B9Z1 124 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 PQLC2Q6ZP29 291 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 OR11H4Q8NGC9 324 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 BLNKQ8WV28 456 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 C20orf173Q96LM9 149 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 ZNF586Q9NXT0 402 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 PRELID1Q9Y255 219 aa13.78□□□□□ -0.2
CYSTM1-201ENST00000261811 CDC34P49427 236 aaPredicted RBP13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 RAB2AP61019 212 aa13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 RNF141Q8WVD5 230 aa13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 RPUSD4Q96CM3 377 aaKnown RBP13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 RNF183Q96D59 192 aa13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 SAT2Q96F10 170 aaPredicted RBP13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 FAM167A-AS1Q96KT0 104 aa13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 HYLS1Q96M11 299 aa13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 PPP1R14DQ9NXH3 145 aa13.77□□□□□ -0.21
CYSTM1-201ENST00000261811 H3BTX0 84 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 BCL2L11O43521 198 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 C1QBP02746 253 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 C4BPBP20851 252 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 UBE2L3P68036 154 aaKnown RBP13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 AKR1C8PQ5T2L2 129 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 GDF5OSQ5U4N7 250 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 ACTR3CQ9C0K3 210 aaPredicted RBP13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 SH3BGRL3Q9H299 93 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 RETNQ9HD89 108 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 RFNGQ9Y644 331 aa13.76□□□□□ -0.21
CYSTM1-201ENST00000261811 F6UB75 175 aa13.75□□□□□ -0.21
CYSTM1-201ENST00000261811 IGKV3-20P01619 116 aa13.75□□□□□ -0.21
CYSTM1-201ENST00000261811 OR10J4P0C629 311 aa13.75□□□□□ -0.21
CYSTM1-201ENST00000261811 OR10J6PQ8NGY7 276 aa13.75□□□□□ -0.21
CYSTM1-201ENST00000261811 MRPL53Q96EL3 112 aaKnown RBP13.75□□□□□ -0.21
CYSTM1-201ENST00000261811 WWC2-AS2Q96NR7 200 aa13.75□□□□□ -0.21
CYSTM1-201ENST00000261811 OVOL2Q9BRP0 275 aa13.75□□□□□ -0.21
CYSTM1-201ENST00000261811 ZNF471Q9BX82 626 aaPredicted RBP13.75□□□□□ -0.21
CYSTM1-201ENST00000261811 SLC17A3O00476 420 aa13.74□□□□□ -0.21
CYSTM1-201ENST00000261811 HIST1H1AQ02539 215 aaPredicted RBP13.74□□□□□ -0.21
CYSTM1-201ENST00000261811 TMUB2Q71RG4 321 aa13.74□□□□□ -0.21
CYSTM1-201ENST00000261811 LYPD1Q8N2G4 141 aa13.74□□□□□ -0.21
CYSTM1-201ENST00000261811 OR8A1Q8NGG7 326 aa13.74□□□□□ -0.21
CYSTM1-201ENST00000261811 FXYD5Q96DB9 178 aa13.74□□□□□ -0.21
CYSTM1-201ENST00000261811 CYTL1Q9NRR1 136 aa13.74□□□□□ -0.21
CYSTM1-201ENST00000261811 AMBPP02760 352 aa13.73□□□□□ -0.21
CYSTM1-201ENST00000261811 HLA-DMBP28068 263 aa13.73□□□□□ -0.21
CYSTM1-201ENST00000261811 CNN1P51911 297 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms