RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 INS-IGF2F8WCM5 200 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 CDKN1BP46527 198 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 C8orf86Q6ZUL3 223 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 C14orf178Q8N769 122 aaPredicted RBP10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 IGKCP01834 107 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 OR2K2Q8NGT1 345 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 CLPSL1A2RUU4 121 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 IGKV1-5P01602 117 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 CCL18P55774 89 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 CLDN16Q9Y5I7 305 aa10.88□□□□□ -0.67
PDGFRB-201ENST00000261799 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 SLC25A2Q9BXI2 301 aa10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 A0A0U1RRA0 63 aa10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 MS4A6AQ9H2W1 248 aa10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 HOXD3P31249 432 aaPredicted RBP10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 TMEM14BQ9NUH8 114 aa10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 GGTLC3B5MD39 225 aa10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 IGHV4-38-2P0DP08 117 aa10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 PUSL1Q8N0Z8 303 aaKnown RBP10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 TMEM256Q8N2U0 113 aa10.87□□□□□ -0.67
PDGFRB-201ENST00000261799 MYCNOSP40205 109 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 DUX4L9Q6RFH8 374 aaPredicted RBP10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 IFITM3Q01628 133 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 GFI1Q99684 422 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 RLFQ13129 1914 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 CABIN1Q9Y6J0 2220 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 IGHV3-16A0A0C4DH30 117 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 SPXQ9BT56 116 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 NUP210Q8TEM1 1887 aaPredicted RBP10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 TMEM238C9JI98 176 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 CD300CQ08708 224 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 FOXI2Q6ZQN5 318 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 PIFOQ8TCI5 191 aa10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 NUP214P35658 2090 aaPredicted RBP10.86□□□□□ -0.67
PDGFRB-201ENST00000261799 CHCHD1Q96BP2 118 aaKnown RBP10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 SMPXQ9UHP9 88 aa10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 NLRC5Q86WI3 1866 aa10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 PLP1P60201 277 aa10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 TMEM243Q9BU79 118 aa10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 LINC00614P0C842 121 aa10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 TMEM75Q8N9X5 138 aa10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 GATD1Q8NB37 220 aa10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 NDUFA4L2Q9NRX3 87 aa10.85□□□□□ -0.67
PDGFRB-201ENST00000261799 LEPROTO15243 131 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 ZNF843Q8N446 348 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 M0R2P5 195 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 RPP25LQ8N5L8 163 aaKnown RBP10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 IGKV2D-24A0A075B6R9 120 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 A0A087WWC5 75 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 ATP6V0BQ99437 205 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 TSC2P49815 1807 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 LDLRAD4O15165 306 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 TMEM14EPQ6UXP3 125 aa10.84□□□□□ -0.67
PDGFRB-201ENST00000261799 TNFRSF6BO95407 300 aa10.83□□□□□ -0.67
PDGFRB-201ENST00000261799 Q5BKY6 102 aa10.83□□□□□ -0.67
PDGFRB-201ENST00000261799 RNF126Q9BV68 326 aa10.83□□□□□ -0.67
PDGFRB-201ENST00000261799 LIME1Q9H400 295 aa10.83□□□□□ -0.67
PDGFRB-201ENST00000261799 SMAD5-AS1Q9Y6J3 95 aa10.83□□□□□ -0.67
PDGFRB-201ENST00000261799 NINQ8N4C6 2090 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 TTC32Q5I0X7 151 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 C8orf31Q8N9H6 132 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 F8W735 103 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 SPART-AS1P0CW21 52 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 NTF4P34130 210 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 OCC1Q8TAD7 63 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 D6R8Y8 96 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 NCR2O95944 276 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 LHFPL1Q86WI0 220 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 MBD3L1Q8WWY6 194 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 VSIRQ9H7M9 311 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 ZNF503-AS2A6NEH8 195 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 PFN1P07737 140 aaKnown RBP10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 WFDC1Q9HC57 220 aa10.83□□□□□ -0.68
PDGFRB-201ENST00000261799 CENPVL3A0A0U1RRI6 287 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 LINC00205P59089 165 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 GNB1LQ9BYB4 327 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 LAMTOR3Q9UHA4 124 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 ICOSQ9Y6W8 199 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 I3L3M4 83 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 GAGE6Q13070 117 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 DEFB136Q30KP8 78 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 WDR86Q86TI4 376 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 LY6G5BQ8NDX9 201 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 DEFB104AQ8WTQ1 72 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 A0A096LPF7 62 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 SLURP1P55000 103 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 Q86TA4 180 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 OVOL2Q9BRP0 275 aa10.82□□□□□ -0.68
PDGFRB-201ENST00000261799 TRAV12-2A0A075B6T6 113 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 RHOHQ15669 191 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 OR11H6Q8NGC7 330 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 SPAG8Q99932 426 aaPredicted RBP10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 RNF222A6NCQ9 220 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 PGPEP1LA6NFU8 196 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 CD5LO43866 347 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms