RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 FAM231DQ6ZW35 169 aa21.41■■□□□ 1.02
CCM2-201ENST00000258781 USMG5Q96IX5 58 aa21.41■■□□□ 1.02
CCM2-201ENST00000258781 NOL4LQ96MY1 436 aaPredicted RBP21.41■■□□□ 1.02
CCM2-201ENST00000258781 SMR3AQ99954 134 aa21.41■■□□□ 1.02
CCM2-201ENST00000258781 RNASE7Q9H1E1 156 aaKnown RBP21.41■■□□□ 1.02
CCM2-201ENST00000258781 TPPP2P59282 170 aa21.4■■□□□ 1.02
CCM2-201ENST00000258781 NHLRC2Q8NBF2 726 aa21.4■■□□□ 1.02
CCM2-201ENST00000258781 IGHV3-35A0A0C4DH35 117 aa21.39■■□□□ 1.02
CCM2-201ENST00000258781 TRBV6-1A0A0K0K1D8 114 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 UBE2CO00762 179 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BKO60814 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 LTAP01374 205 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BJP06899 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BOP23527 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BBP33778 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BDP58876 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BCP62807 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST2H2BEQ16778 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.39■■□□□ 1.01
CCM2-201ENST00000258781 Q6ZS46 218 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 OR8I2Q8N0Y5 310 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 FRZBQ92765 325 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BHQ93079 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BNQ99877 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 HIST1H2BMQ99879 126 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 YAE1D1Q9NRH1 226 aa21.39■■□□□ 1.01
CCM2-201ENST00000258781 ZNF320A2RRD8 509 aa21.38■■□□□ 1.01
CCM2-201ENST00000258781 MTORP42345 2549 aa21.38■■□□□ 1.01
CCM2-201ENST00000258781 IGLV1-40P01703 118 aa21.37■■□□□ 1.01
CCM2-201ENST00000258781 PSG9Q00887 426 aa21.37■■□□□ 1.01
CCM2-201ENST00000258781 CFHR3Q02985 330 aa21.37■■□□□ 1.01
CCM2-201ENST00000258781 MLST8Q9BVC4 326 aa21.37■■□□□ 1.01
CCM2-201ENST00000258781 AAMDCQ9H7C9 122 aa21.37■■□□□ 1.01
CCM2-201ENST00000258781 CLPSL1A2RUU4 121 aa21.36■■□□□ 1.01
CCM2-201ENST00000258781 ZNF253O75346 499 aa21.36■■□□□ 1.01
CCM2-201ENST00000258781 TRGC1P0CF51 173 aa21.36■■□□□ 1.01
CCM2-201ENST00000258781 RPL15P61313 204 aaKnown RBP21.36■■□□□ 1.01
CCM2-201ENST00000258781 Q6YL49 198 aa21.36■■□□□ 1.01
CCM2-201ENST00000258781 GOLT1AQ6ZVE7 132 aa21.36■■□□□ 1.01
CCM2-201ENST00000258781 Q86TA4 180 aa21.36■■□□□ 1.01
CCM2-201ENST00000258781 HIVEP1P15822 2718 aa21.36■■□□□ 1.01
CCM2-201ENST00000258781 ARL6IP6Q8N6S5 226 aa21.35■■□□□ 1.01
CCM2-201ENST00000258781 VPREB3Q9UKI3 123 aa21.35■■□□□ 1.01
CCM2-201ENST00000258781 K7EQM0 130 aa21.35■■□□□ 1.01
CCM2-201ENST00000258781 BUB3O43684 328 aa21.35■■□□□ 1.01
CCM2-201ENST00000258781 ACTL10Q5JWF8 245 aa21.35■■□□□ 1.01
CCM2-201ENST00000258781 TMEM75Q8N9X5 138 aa21.35■■□□□ 1.01
CCM2-201ENST00000258781 IGHV3OR16-8A0A075B7F1 116 aa21.34■■□□□ 1.01
CCM2-201ENST00000258781 PF4V1P10720 104 aa21.34■■□□□ 1.01
CCM2-201ENST00000258781 ARL3P36405 182 aa21.34■■□□□ 1.01
CCM2-201ENST00000258781 FABP9Q0Z7S8 132 aa21.34■■□□□ 1.01
CCM2-201ENST00000258781 C1orf194Q5T5A4 169 aa21.34■■□□□ 1.01
CCM2-201ENST00000258781 SGK494Q96LW2 274 aa21.34■■□□□ 1.01
CCM2-201ENST00000258781 PRDM13Q9H4Q3 707 aa21.34■■□□□ 1.01
CCM2-201ENST00000258781 SMAD5-AS1Q9Y6J3 95 aa21.34■■□□□ 1.01
CCM2-201ENST00000258781 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.33■■□□□ 1.01
CCM2-201ENST00000258781 ZNF705GA8MUZ8 300 aaPredicted RBP21.33■■□□□ 1.01
CCM2-201ENST00000258781 IGLV2-11P01706 119 aa21.33■■□□□ 1.01
CCM2-201ENST00000258781 METTL26Q96S19 204 aa21.33■■□□□ 1.01
CCM2-201ENST00000258781 A0A087X0K7 114 aa21.32■■□□□ 1
CCM2-201ENST00000258781 SMUG1Q53HV7 270 aa21.32■■□□□ 1
CCM2-201ENST00000258781 SERTAD4Q9NUC0 356 aa21.32■■□□□ 1
CCM2-201ENST00000258781 A0A0G2JLM5 398 aa21.32■■□□□ 1
CCM2-201ENST00000258781 SERTM2A0A1B0GWG4 89 aa21.32■■□□□ 1
CCM2-201ENST00000258781 SMIM27A0A1W2PRY6 76 aa21.32■■□□□ 1
CCM2-201ENST00000258781 DIRC3C9JPN6 131 aa21.32■■□□□ 1
CCM2-201ENST00000258781 GATCO43716 136 aaKnown RBP21.32■■□□□ 1
CCM2-201ENST00000258781 NUDT10Q8NFP7 164 aa21.32■■□□□ 1
CCM2-201ENST00000258781 NUDT11Q96G61 164 aa21.32■■□□□ 1
CCM2-201ENST00000258781 ZNF492Q9P255 531 aa21.32■■□□□ 1
CCM2-201ENST00000258781 NDUFA6P56556 154 aa21.31■■□□□ 1
CCM2-201ENST00000258781 TMEM183AQ8IXX5 376 aa21.31■■□□□ 1
CCM2-201ENST00000258781 TEX29Q8N6K0 151 aa21.31■■□□□ 1
CCM2-201ENST00000258781 KLK15Q9H2R5 256 aa21.31■■□□□ 1
CCM2-201ENST00000258781 U3KQE9 123 aa21.31■■□□□ 1
CCM2-201ENST00000258781 RPL19P84098 196 aaKnown RBP21.3■■□□□ 1
CCM2-201ENST00000258781 HIVEP2P31629 2446 aa21.3■■□□□ 1
CCM2-201ENST00000258781 CSN1S1P47710 185 aa21.3■■□□□ 1
CCM2-201ENST00000258781 PRR27Q6MZM9 219 aa21.3■■□□□ 1
CCM2-201ENST00000258781 GRAMD2BQ96HH9 432 aa21.3■■□□□ 1
CCM2-201ENST00000258781 TRAV8-1A0A0A6YYK1 113 aa21.29■■□□□ 1
CCM2-201ENST00000258781 HOXA3O43365 443 aaPredicted RBP21.29■■□□□ 1
CCM2-201ENST00000258781 LY6G6DO95868 133 aa21.29■■□□□ 1
CCM2-201ENST00000258781 HOXA5P20719 270 aa21.29■■□□□ 1
CCM2-201ENST00000258781 AKR1D1P51857 326 aa21.29■■□□□ 1
CCM2-201ENST00000258781 TMEM89A2RUT3 159 aa21.28■■□□□ 1
CCM2-201ENST00000258781 NDUFA4O00483 81 aa21.28■■□□□ 1
CCM2-201ENST00000258781 PSG3Q16557 428 aa21.28■■□□□ 1
CCM2-201ENST00000258781 PRNTQ86SH4 94 aa21.28■■□□□ 1
CCM2-201ENST00000258781 SIGLECL1Q8N7X8 197 aa21.28■■□□□ 1
CCM2-201ENST00000258781 ZFP30Q9Y2G7 519 aa21.28■■□□□ 1
CCM2-201ENST00000258781 M0R3E3 92 aa21.28■■□□□ 1
CCM2-201ENST00000258781 IGHG4P01861 327 aa21.28■■□□□ 1
CCM2-201ENST00000258781 TRAPPC1Q9Y5R8 145 aa21.28■■□□□ 1
CCM2-201ENST00000258781 C19orf71A6NCJ1 209 aa21.26■□□□□ 0.99
CCM2-201ENST00000258781 TMEM95Q3KNT9 176 aa21.26■□□□□ 0.99
CCM2-201ENST00000258781 OR4X2Q8NGF9 303 aa21.26■□□□□ 0.99
CCM2-201ENST00000258781 PRSS22Q9GZN4 317 aa21.26■□□□□ 0.99
CCM2-201ENST00000258781 ZNF331Q9NQX6 463 aaPredicted RBP21.26■□□□□ 0.99
CCM2-201ENST00000258781 PSG8Q9UQ74 426 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms