RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MAGT1Q9H0U3 335 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 SLC25A22Q9H936 323 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 DNAH5Q8TE73 4624 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 PMS2P5A8MQ11 134 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 H3BP45 60 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 WRBO00258 174 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 DUSP14O95147 198 aaKnown RBP7.24□□□□□ -1.25
VPS50-201ENST00000251739 PRM2P04554 102 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 AP3S2P59780 193 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 PLP1P60201 277 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 SPINK13Q1W4C9 94 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 TMEM144Q7Z5S9 345 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 BAP18Q8IXM2 172 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 RNF182Q8N6D2 247 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 SHANK2-AS3Q9BTD1 123 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 KRTAP4-5Q9BYR2 181 aa7.24□□□□□ -1.25
VPS50-201ENST00000251739 SLC25A39Q9BZJ4 359 aaPredicted RBP7.24□□□□□ -1.25
VPS50-201ENST00000251739 A0A087X0K7 114 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 ZNF705GA8MUZ8 300 aaPredicted RBP7.23□□□□□ -1.25
VPS50-201ENST00000251739 BOLA2-SMG1P6H3BVE0 249 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 K7EPK0 472 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 ORM2P19652 201 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 CXCL3P19876 107 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 UBE2MP61081 183 aaKnown RBP7.23□□□□□ -1.25
VPS50-201ENST00000251739 RPP30P78346 268 aaKnown RBP7.23□□□□□ -1.25
VPS50-201ENST00000251739 AKR1C1Q04828 323 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 SOHLH1Q5JUK2 328 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 SPANXN5Q5MJ07 72 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 C1orf134Q5TEV5 83 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 IGFL4Q6B9Z1 124 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 TOMM5Q8N4H5 51 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 ZNRF2Q8NHG8 242 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 TMEM208Q9BTX3 173 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 TMEM147Q9BVK8 224 aa7.23□□□□□ -1.25
VPS50-201ENST00000251739 STRAPQ9Y3F4 350 aaKnown RBP7.23□□□□□ -1.25
VPS50-201ENST00000251739 MRPS12O15235 138 aaKnown RBP7.22□□□□□ -1.25
VPS50-201ENST00000251739 PLA2G1BP04054 148 aaKnown RBP7.22□□□□□ -1.25
VPS50-201ENST00000251739 HOXB5P09067 269 aa7.22□□□□□ -1.25
VPS50-201ENST00000251739 RPL7P18124 248 aaKnown RBP7.22□□□□□ -1.25
VPS50-201ENST00000251739 AZU1P20160 251 aa7.22□□□□□ -1.25
VPS50-201ENST00000251739 B2MP61769 119 aa7.22□□□□□ -1.25
VPS50-201ENST00000251739 S100A12P80511 92 aa7.22□□□□□ -1.25
VPS50-201ENST00000251739 RGS21Q2M5E4 152 aa7.22□□□□□ -1.25
VPS50-201ENST00000251739 CYP2G1PQ6ZSU1 146 aa7.22□□□□□ -1.25
VPS50-201ENST00000251739 CCDC190Q86UF4 302 aa7.22□□□□□ -1.25
VPS50-201ENST00000251739 OR8A1Q8NGG7 326 aa7.22□□□□□ -1.25
VPS50-201ENST00000251739 TRAV12-2A0A075B6T6 113 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 NBDYA0A0U1RRE5 68 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 LINC00854A0A1B0GVQ3 168 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 FNDC10F2Z333 226 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 ZNF701M0R085 212 aaPredicted RBP7.21□□□□□ -1.26
VPS50-201ENST00000251739 ADAP1O75689 374 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 CCNKO75909 580 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 LINC00869P0C866 280 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 S100A7P31151 101 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 SELENOTP62341 195 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 POLR2GP62487 172 aaKnown RBP eCLIP7.21□□□□□ -1.26
VPS50-201ENST00000251739 PSG3Q16557 428 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 PYDC2Q56P42 97 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 FAM122CQ6P4D5 195 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 TMEM14EPQ6UXP3 125 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 PATE2Q6UY27 113 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 TMEM256Q8N2U0 113 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 ZNF738Q8NE65 137 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 UHRF2Q96PU4 802 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 HIGD1AQ9Y241 93 aa7.21□□□□□ -1.26
VPS50-201ENST00000251739 C9orf170A2RU37 121 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 ZNF561-AS1K7EIQ3 104 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 HYPMO75409 117 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 IL5P05113 134 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 DEFB130BP0DP73 79 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 DEFB130AP0DP74 79 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 BCAP31P51572 246 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 TAS2R60P59551 318 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 RAP2BP61225 183 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 DLK1P80370 383 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 TEPPQ6URK8 271 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 LINC00612Q8N6U2 182 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 LINC00469Q8N7U9 141 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 RNASE8Q8TDE3 154 aaKnown RBP7.2□□□□□ -1.26
VPS50-201ENST00000251739 SMIM8Q96KF7 97 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 MBD2Q9UBB5 411 aa7.2□□□□□ -1.26
VPS50-201ENST00000251739 CBY3A6NI87 242 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 NOL3O60936 208 aaKnown RBP7.19□□□□□ -1.26
VPS50-201ENST00000251739 CDK2AP2O75956 126 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 ATP5G1P05496 136 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 CXCL2P19875 107 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 ATP5G3P48201 142 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 HIST1H1AQ02539 215 aaPredicted RBP7.19□□□□□ -1.26
VPS50-201ENST00000251739 FCN2Q15485 313 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 C16orf74Q96GX8 76 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 SRRQ9GZT4 340 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 PSENENQ9NZ42 101 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 RCL1Q9Y2P8 373 aaKnown RBP7.19□□□□□ -1.26
VPS50-201ENST00000251739 LINC00588Q9Y4M8 146 aa7.19□□□□□ -1.26
VPS50-201ENST00000251739 SMCO3A2RU48 225 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 F5H768 121 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 SSSCA1O60232 199 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 NDUFB6O95139 128 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms