RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 FAM78BQ5VT40 261 aa17.72■□□□□ 0.43
SDF2L1-201ENST00000248958 MORN5Q5VZ52 161 aa17.72■□□□□ 0.43
SDF2L1-201ENST00000248958 HRH4Q9H3N8 390 aa17.72■□□□□ 0.43
SDF2L1-201ENST00000248958 CLEC5AQ9NY25 188 aa17.72■□□□□ 0.43
SDF2L1-201ENST00000248958 F6UB75 175 aa17.71■□□□□ 0.43
SDF2L1-201ENST00000248958 IFNA5P01569 189 aa17.71■□□□□ 0.43
SDF2L1-201ENST00000248958 MIFP14174 115 aa17.71■□□□□ 0.43
SDF2L1-201ENST00000248958 ZNF738Q8NE65 137 aa17.71■□□□□ 0.43
SDF2L1-201ENST00000248958 ZNF331Q9NQX6 463 aaPredicted RBP17.71■□□□□ 0.43
SDF2L1-201ENST00000248958 XCL2Q9UBD3 114 aa17.71■□□□□ 0.43
SDF2L1-201ENST00000248958 A8MTW9 85 aa17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 IGKV3-20P01619 116 aa17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 GIPP09681 153 aaPredicted RBP17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 IGLC2P0DOY2 106 aa17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 PSG3Q16557 428 aa17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 IGFL4Q6B9Z1 124 aa17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 RNF182Q8N6D2 247 aa17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 SCGB1C1Q8TD33 95 aa17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 PARD6GQ9BYG4 376 aaPredicted RBP17.7■□□□□ 0.42
SDF2L1-201ENST00000248958 TMEM14CQ9P0S9 112 aa17.69■□□□□ 0.42
SDF2L1-201ENST00000248958 DNAH7Q8WXX0 4024 aa17.69■□□□□ 0.42
SDF2L1-201ENST00000248958 TRAV5A0A0B4J249 113 aa17.68■□□□□ 0.42
SDF2L1-201ENST00000248958 ZNF253O75346 499 aa17.67■□□□□ 0.42
SDF2L1-201ENST00000248958 AMBPP02760 352 aa17.67■□□□□ 0.42
SDF2L1-201ENST00000248958 Q8NAQ8 132 aa17.67■□□□□ 0.42
SDF2L1-201ENST00000248958 MRPL32Q9BYC8 188 aaKnown RBP17.67■□□□□ 0.42
SDF2L1-201ENST00000248958 SMIM3Q9BZL3 60 aa17.67■□□□□ 0.42
SDF2L1-201ENST00000248958 X6R8D5 127 aa17.67■□□□□ 0.42
SDF2L1-201ENST00000248958 CNN1P51911 297 aaKnown RBP17.66■□□□□ 0.42
SDF2L1-201ENST00000248958 SAT2Q96F10 170 aaPredicted RBP17.66■□□□□ 0.42
SDF2L1-201ENST00000248958 MFFQ9GZY8 342 aa17.66■□□□□ 0.42
SDF2L1-201ENST00000248958 FXYD7P58549 80 aa17.65■□□□□ 0.42
SDF2L1-201ENST00000248958 OR8A1Q8NGG7 326 aa17.65■□□□□ 0.42
SDF2L1-201ENST00000248958 NEU1Q99519 415 aa17.65■□□□□ 0.42
SDF2L1-201ENST00000248958 SLC35B3Q9H1N7 401 aa17.65■□□□□ 0.42
SDF2L1-201ENST00000248958 SMIM9A6NGZ8 99 aa17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 H3BQ15 152 aa17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 HIST1H1EP10412 219 aaKnown RBP17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 HLA-DMBP28068 263 aa17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 GCSAMLQ5JQS6 135 aa17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 AMTNQ6UX39 209 aa17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 ZNF705AQ6ZN79 300 aaPredicted RBP17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 C11orf45Q8TAV5 145 aa17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 RPUSD4Q96CM3 377 aaKnown RBP17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 AQP10Q96PS8 301 aa17.64■□□□□ 0.41
SDF2L1-201ENST00000248958 IGHV4-28A0A0C4DH34 117 aa17.63■□□□□ 0.41
SDF2L1-201ENST00000248958 CXorf65A6NEN9 183 aa17.63■□□□□ 0.41
SDF2L1-201ENST00000248958 NUPR2A6NF83 97 aa17.63■□□□□ 0.41
SDF2L1-201ENST00000248958 SNRPCP09234 159 aaKnown RBP17.63■□□□□ 0.41
SDF2L1-201ENST00000248958 PDE6HQ13956 83 aa17.63■□□□□ 0.41
SDF2L1-201ENST00000248958 ZNF266Q14584 549 aa17.63■□□□□ 0.41
SDF2L1-201ENST00000248958 ZNF586Q9NXT0 402 aa17.63■□□□□ 0.41
SDF2L1-201ENST00000248958 GOLT1BQ9Y3E0 138 aa17.63■□□□□ 0.41
SDF2L1-201ENST00000248958 SLC17A3O00476 420 aa17.62■□□□□ 0.41
SDF2L1-201ENST00000248958 HIST1H1AQ02539 215 aaPredicted RBP17.62■□□□□ 0.41
SDF2L1-201ENST00000248958 FUT9Q9Y231 359 aa17.62■□□□□ 0.41
SDF2L1-201ENST00000248958 TRBV19A0A075B6N1 114 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 ZNF705FA8MVS1 300 aaPredicted RBP17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 H3BTX0 84 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 ZNF705DP0CH99 300 aaPredicted RBP17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 ZNF705BP0CI00 300 aaPredicted RBP17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 RBMY1A1P0DJD3 496 aaKnown RBP17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 RBMY1CP0DJD4 496 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 PMS2P11Q13670 270 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 RBMY1FQ15415 496 aaKnown RBP17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 FFAR4Q5NUL3 377 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 IGF2BP2-AS1Q96M15 143 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 SLC25A2Q9BXI2 301 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 WFDC1Q9HC57 220 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 PPP1R14DQ9NXH3 145 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 TIMM9Q9Y5J7 89 aa17.61■□□□□ 0.41
SDF2L1-201ENST00000248958 DEFB4AO15263 64 aa17.6■□□□□ 0.41
SDF2L1-201ENST00000248958 RHOBP62745 196 aa17.6■□□□□ 0.41
SDF2L1-201ENST00000248958 MIR17HGQ75NE6 70 aa17.6■□□□□ 0.41
SDF2L1-201ENST00000248958 INO80EQ8NBZ0 244 aaPredicted RBP17.6■□□□□ 0.41
SDF2L1-201ENST00000248958 MRPL53Q96EL3 112 aaKnown RBP17.6■□□□□ 0.41
SDF2L1-201ENST00000248958 OR51M1Q9H341 326 aa17.6■□□□□ 0.41
SDF2L1-201ENST00000248958 PRELID1Q9Y255 219 aa17.6■□□□□ 0.41
SDF2L1-201ENST00000248958 BOLA2-SMG1P6H3BVE0 249 aa17.59■□□□□ 0.41
SDF2L1-201ENST00000248958 OR2T35Q8NGX2 323 aa17.59■□□□□ 0.41
SDF2L1-201ENST00000248958 OR10J6PQ8NGY7 276 aa17.59■□□□□ 0.41
SDF2L1-201ENST00000248958 FAM167A-AS1Q96KT0 104 aa17.59■□□□□ 0.41
SDF2L1-201ENST00000248958 TMEM189A5PLL7 270 aa17.58■□□□□ 0.4
SDF2L1-201ENST00000248958 PYYP10082 97 aa17.58■□□□□ 0.4
SDF2L1-201ENST00000248958 Q5BKY6 102 aa17.58■□□□□ 0.4
SDF2L1-201ENST00000248958 CEMP1Q6PRD7 247 aaPredicted RBP17.58■□□□□ 0.4
SDF2L1-201ENST00000248958 KLK5Q9Y337 293 aaPredicted RBP17.58■□□□□ 0.4
SDF2L1-201ENST00000248958 IGHV3OR16-12A0A075B7B8 117 aa17.57■□□□□ 0.4
SDF2L1-201ENST00000248958 INSP01308 110 aa17.57■□□□□ 0.4
SDF2L1-201ENST00000248958 TAS2R45P59539 299 aa17.57■□□□□ 0.4
SDF2L1-201ENST00000248958 SPINK13Q1W4C9 94 aa17.57■□□□□ 0.4
SDF2L1-201ENST00000248958 ACOT6Q3I5F7 207 aaPredicted RBP17.57■□□□□ 0.4
SDF2L1-201ENST00000248958 PAXXQ9BUH6 204 aa17.57■□□□□ 0.4
SDF2L1-201ENST00000248958 AAMDCQ9H7C9 122 aa17.57■□□□□ 0.4
SDF2L1-201ENST00000248958 RFNGQ9Y644 331 aa17.57■□□□□ 0.4
SDF2L1-201ENST00000248958 STARD9Q9P2P6 4700 aa17.56■□□□□ 0.4
SDF2L1-201ENST00000248958 NBEAP1P0C6P0 100 aa17.56■□□□□ 0.4
SDF2L1-201ENST00000248958 NANOS2P60321 138 aaKnown RBP17.56■□□□□ 0.4
SDF2L1-201ENST00000248958 C1orf158Q8N1D5 194 aa17.56■□□□□ 0.4
SDF2L1-201ENST00000248958 PHLDA1Q8WV24 401 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms