RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CFHR1Q03591 330 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 Q9HAA7 133 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 TAL2Q16559 108 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 TPTE2P1Q5T6R2 138 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 VCYO14598 125 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 PMVKQ15126 192 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 BPESC1Q9GZL8 116 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 IGHV1-3A0A0C4DH29 117 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 NHLRC3Q5JS37 347 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 SEC11AP67812 179 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 KNCNA6PVL3 124 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 SAA4P35542 130 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 OCC1Q8TAD7 63 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 IGF2BP2-AS1Q96M15 143 aa10.86□□□□□ -0.67
NEK9-201ENST00000238616 OVOL2Q9BRP0 275 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 EFNA4P52798 201 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 APOC4P55056 127 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 C20orf204Q6ZNR8 217 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 IGKV1D-13A0A0B4J2D9 117 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 IGKV1-13P0DP09 117 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 CHCHD1Q96BP2 118 aaKnown RBP10.85□□□□□ -0.67
NEK9-201ENST00000238616 GNB1LQ9BYB4 327 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.85□□□□□ -0.67
NEK9-201ENST00000238616 C10orf55Q5SWW7 151 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 LYZL1Q6UWQ5 148 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 TNFRSF14Q92956 283 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 AZU1P20160 251 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 SELLP14151 372 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 IL17RELQ6ZVW7 336 aa10.85□□□□□ -0.67
NEK9-201ENST00000238616 Q0VFX4 171 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 A6NNC1 897 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 SH2D1AO60880 128 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 SRP19P09132 144 aaKnown RBP10.84□□□□□ -0.67
NEK9-201ENST00000238616 DEFB131AP59861 70 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 GTSF1LQ9H1H1 148 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 LINC00518Q8N0U6 118 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 SMIM10L1P0DMW3 83 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 TCTEX1D4Q5JR98 221 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 SMIM10Q96HG1 83 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 IGHV1-8P0DP01 117 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 C5orf47Q569G3 176 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 J3QW42 95 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 ANGP03950 147 aaKnown RBP10.84□□□□□ -0.67
NEK9-201ENST00000238616 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 MYMXA0A1B0GTQ4 84 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 TMEM256Q8N2U0 113 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 C18orf12Q96KH6 178 aa10.84□□□□□ -0.67
NEK9-201ENST00000238616 GAGE12JA6NER3 117 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 GAGE1Q13065 139 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 GAGE4Q13068 117 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 GAGE5Q13069 117 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 BCL6BQ8N143 479 aaPredicted RBP10.83□□□□□ -0.68
NEK9-201ENST00000238616 CTHRC1Q96CG8 243 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 NR2C2APQ86WQ0 139 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 IGHV4-4A0A075B6R2 117 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 DUTP33316 252 aaKnown RBP10.83□□□□□ -0.68
NEK9-201ENST00000238616 C9JAW5 83 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 TMEM178BH3BS89 294 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 NXPH4O95158 308 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 CD5P06127 495 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 GUSBP1Q15486 140 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 BMPERQ8N8U9 685 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 EFNA2O43921 213 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 RPL18AQ02543 176 aaKnown RBP10.83□□□□□ -0.68
NEK9-201ENST00000238616 GAGE6Q13070 117 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 LINC01590Q5TEZ4 76 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 SP5Q6BEB4 398 aaPredicted RBP10.83□□□□□ -0.68
NEK9-201ENST00000238616 A0A1W2PRE2 83 aa10.83□□□□□ -0.68
NEK9-201ENST00000238616 BUB1B-PAK6H3BSN5 160 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 TMEM158Q8WZ71 300 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 KLF5Q13887 457 aaPredicted RBP10.82□□□□□ -0.68
NEK9-201ENST00000238616 WBP1Q96G27 269 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 MCRIP2Q9BUT9 160 aaKnown RBP10.82□□□□□ -0.68
NEK9-201ENST00000238616 IGHV3-38A0A0C4DH36 116 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 NDUFS8O00217 210 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 GAGE7O76087 117 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 GAGE12FP0CL80 117 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 GAGE12GP0CL81 117 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 GAGE12IP0CL82 117 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 HAMPP81172 84 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 USMG5Q96IX5 58 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 SCRT2Q9NQ03 307 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 ADAMTS20P59510 1910 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 TRAV12-2A0A075B6T6 113 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 ZNF883P0CG24 379 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 VWC2Q2TAL6 325 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 EGR2P11161 476 aaPredicted RBP10.82□□□□□ -0.68
NEK9-201ENST00000238616 IFITM3Q01628 133 aa10.82□□□□□ -0.68
NEK9-201ENST00000238616 IGKV2D-24A0A075B6R9 120 aa10.81□□□□□ -0.68
NEK9-201ENST00000238616 CCDC168Q8NDH2 2452 aa10.81□□□□□ -0.68
NEK9-201ENST00000238616 PINLYPA6NC86 204 aa10.81□□□□□ -0.68
NEK9-201ENST00000238616 TSKUQ8WUA8 353 aa10.81□□□□□ -0.68
NEK9-201ENST00000238616 FAM223BA6NKX1 122 aa10.81□□□□□ -0.68
NEK9-201ENST00000238616 SLC25A16P16260 332 aa10.81□□□□□ -0.68
NEK9-201ENST00000238616 FAM223AQ8IWN6 122 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms