RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 VSIRQ9H7M9 311 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 PYYP10082 97 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 MANBALQ9NQG1 85 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 MED9Q9NWA0 146 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 CLEC5AQ9NY25 188 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 IGKV1D-37A0A075B6S9 117 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 SPATA31B1PQ5VZV4 182 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 ZNF688P0C7X2 276 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 CNN1P51911 297 aaKnown RBP8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 PSMG4Q5JS54 123 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 PRR31Q5SQ13 230 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 WI2-2373I1.2A0A1W2PRP0 233 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 OR11H12B2RN74 326 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 H3BRN7 92 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 CHEK1O14757 476 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 PAGE4O60829 102 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 ICAM4Q14773 271 aa8.52□□□□□ -1.05
TNFAIP3-201ENST00000237289 CRYBB3P26998 211 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 DEFB121Q5J5C9 76 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 RPP25LQ8N5L8 163 aaKnown RBP8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 TMEM37Q8WXS4 190 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 TMEM208Q9BTX3 173 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 PLP1P60201 277 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 NUTF2P61970 127 aaKnown RBP8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 CT45A10P0DMU9 189 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 IGLL1P15814 213 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 HIST1H1AQ02539 215 aaPredicted RBP8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 TMEM78Q5T7P6 136 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 STHQ8IWL8 128 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 SVBPQ8N300 66 aa8.51□□□□□ -1.05
TNFAIP3-201ENST00000237289 C11orf94C9JXX5 98 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 CD300EQ496F6 205 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 DAZAP1Q96EP5 407 aaKnown RBP8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 BUB3O43684 328 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 IGKV3-20P01619 116 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 S100A12P80511 92 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 BATFQ16520 125 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 SPAG8Q99932 426 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 STAG3L2P0CL84 134 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 STAG3L3P0CL85 134 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 GP9P14770 177 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 NBPF19A0A087WUL8 3843 aa8.5□□□□□ -1.05
TNFAIP3-201ENST00000237289 TMEM213A2RRL7 107 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 PDZD11Q5EBL8 140 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 MYOZ3Q8TDC0 251 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 TMPRSS5Q9H3S3 457 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 TRAV25A0A0B4J276 109 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 DEFB131AP59861 70 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 C21orf62-AS1Q17RA5 79 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 C16orf54Q6UWD8 224 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 OTOGQ6ZRI0 2925 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 Q9H3A6 140 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 TET2Q6N021 2002 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 RPS10P46783 165 aaKnown RBP8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 CD81P60033 236 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 ZFAND3Q9H8U3 227 aa8.49□□□□□ -1.05
TNFAIP3-201ENST00000237289 VAX2Q9UIW0 290 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 ZNF705GA8MUZ8 300 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 J3KRW8 73 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 MGST1P10620 155 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 FLI1Q01543 452 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 PATE2Q6UY27 113 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 TMEM61Q8N0U2 210 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 RPUSD4Q96CM3 377 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 MS4A6AQ9H2W1 248 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 A8MWP6 167 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 F8W735 103 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 ISLRO14498 428 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 DUSP14O95147 198 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 APOHP02749 345 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 MDFIQ99750 246 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 TXNDC17Q9BRA2 123 aa8.48□□□□□ -1.05
TNFAIP3-201ENST00000237289 RBFOX3A6NFN3 312 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 TSPOP30536 169 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 DEFB114Q30KQ6 69 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 LINC00482Q8N8I6 264 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 OR2K2Q8NGT1 345 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 OTORQ9NRC9 128 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 SNAPINO95295 136 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 C5orf17Q8NAS9 161 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 CLRN3Q8NCR9 226 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 PDE6HQ13956 83 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 SOHLH1Q5JUK2 328 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 CSN3P07498 182 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 ACTL10Q5JWF8 245 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 IGFL4Q6B9Z1 124 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 GOLT1AQ6ZVE7 132 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 MBD3L1Q8WWY6 194 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 TMEM14CQ9P0S9 112 aa8.47□□□□□ -1.05
TNFAIP3-201ENST00000237289 PDE6DO43924 150 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 BCL2P10415 239 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 KRTAP10-3P60369 221 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 RHEBQ15382 184 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 KLK9Q2XQG4 91 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 SLC25A2Q9BXI2 301 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 KLK9Q9UKQ9 250 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 LOC105371267A0A1B0GV96 52 aa8.46□□□□□ -1.06
TNFAIP3-201ENST00000237289 A0A1W2PRE2 83 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms