RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 IGHV4-4A0A075B6R2 117 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 A0A1W2PPM0 123 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 MPZP25189 248 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 UTF1Q5T230 341 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 ACP7Q6ZNF0 438 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 Q6ZT83 130 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 PRIMA1Q86XR5 153 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 NUP35Q8NFH5 326 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 MARF1Q9Y4F3 1742 aaKnown RBP9.16□□□□□ -0.94
MSH6-201ENST00000234420 ATRXP46100 2492 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 A0A0J9YY99 117 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 RPL18AQ02543 176 aaKnown RBP9.16□□□□□ -0.94
MSH6-201ENST00000234420 EFNB3Q15768 340 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 RASL10AQ92737 203 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 XCL2Q9UBD3 114 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 IQCF6A8MYZ5 107 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 TIMM21Q9BVV7 248 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 H0YIZ8 118 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 K7ERJ3 54 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 LINC01559Q495D7 138 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 SPSB3Q6PJ21 355 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 AMTNQ6UX39 209 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 IGF2BP2-AS1Q96M15 143 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 SPRR3Q9UBC9 169 aa9.16□□□□□ -0.94
MSH6-201ENST00000234420 IGHV2OR16-5A0A0B4J2B6 119 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 FOXF2Q12947 444 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 LYZL1Q6UWQ5 148 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 WFDC9Q8NEX5 89 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 BPESC1Q9GZL8 116 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 IGKV2D-24A0A075B6R9 120 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 MYMXA0A1B0GTQ4 84 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 EGR2P11161 476 aaPredicted RBP9.15□□□□□ -0.94
MSH6-201ENST00000234420 NOVP48745 357 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 UBE2E1P51965 193 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 IGLV1-36A0A0B4J1U3 117 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 NBL1P41271 181 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 A0A1W2PR77 199 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 REG4Q9BYZ8 158 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 MSRB2Q9Y3D2 182 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 U3KQE9 123 aa9.15□□□□□ -0.94
MSH6-201ENST00000234420 LY6G6FQ5SQ64 297 aa9.15□□□□□ -0.95
MSH6-201ENST00000234420 SPANXCQ9NY87 97 aa9.15□□□□□ -0.95
MSH6-201ENST00000234420 C18orf12Q96KH6 178 aa9.15□□□□□ -0.95
MSH6-201ENST00000234420 C1QTNF5Q9BXJ0 243 aa9.15□□□□□ -0.95
MSH6-201ENST00000234420 IGKV2-40A0A087WW87 121 aaPredicted RBP9.14□□□□□ -0.95
MSH6-201ENST00000234420 C17orf100A8MU93 164 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
MSH6-201ENST00000234420 IGHG4P01861 327 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 PILRAQ9UKJ1 303 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 FAM90A9PA6NNJ1 464 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 IGFL4Q6B9Z1 124 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 SLC25A47Q6Q0C1 308 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 LINC01551Q86U37 167 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 NYNRINQ9P2P1 1898 aaKnown RBP9.14□□□□□ -0.95
MSH6-201ENST00000234420 NGFRP08138 427 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 BTCP35070 178 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 EP300Q09472 2414 aaPredicted RBP9.14□□□□□ -0.95
MSH6-201ENST00000234420 UPK2O00526 184 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 C20orf144Q9BQM9 153 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 RREB1Q92766 1687 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 ARID2Q68CP9 1835 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 CEP192Q8TEP8 1941 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 LAIR2Q6ISS4 152 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 SLC25A48Q6ZT89 311 aaKnown RBP9.14□□□□□ -0.95
MSH6-201ENST00000234420 DSCR8Q96T75 97 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 ALS2Q96Q42 1657 aa9.14□□□□□ -0.95
MSH6-201ENST00000234420 NBR2O15453 112 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 CARD19Q96LW7 228 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 VWA8A3KMH1 1905 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 TIMM23O14925 209 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 ERCC8Q13216 396 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 C1orf159Q96HA4 380 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 RFNGQ9Y644 331 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 COL22A1Q8NFW1 1626 aaPredicted RBP9.13□□□□□ -0.95
MSH6-201ENST00000234420 AMN1Q8IY45 258 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 KNCNA6PVL3 124 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 RAMP3O60896 148 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 CD160O95971 181 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 A0A0G2JNJ9 132 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 DSCR9P59020 149 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 Q6ZVH6 145 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 Q9UFV3 132 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
MSH6-201ENST00000234420 MRPL27Q9P0M9 148 aaKnown RBP9.13□□□□□ -0.95
MSH6-201ENST00000234420 A0A1B0GTI1 187 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 C12orf77C9JDV5 145 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 SLC50A1Q9BRV3 221 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 CCL25O15444 150 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 MMP23AO75900 390 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 NOTCH3Q9UM47 2321 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 PAX9P55771 341 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 HERV-K104P63124 156 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 BVES-AS1Q5T3Y7 98 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 V9GYY9 64 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 PTPRFP10586 1907 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms