RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 IGKV2-40A0A087WW87 121 aaPredicted RBP6.35□□□□□ -1.39
NANOG-201ENST00000229307 TEX48A0A1B0GUV7 120 aa6.35□□□□□ -1.39
NANOG-201ENST00000229307 LINC01549A6NIU2 74 aa6.35□□□□□ -1.39
NANOG-201ENST00000229307 H0YIZ8 118 aa6.35□□□□□ -1.39
NANOG-201ENST00000229307 IGKV2D-40P01614 121 aaPredicted RBP6.35□□□□□ -1.39
NANOG-201ENST00000229307 RPLP1P05386 114 aaKnown RBP6.35□□□□□ -1.39
NANOG-201ENST00000229307 DAD1P61803 113 aa6.35□□□□□ -1.39
NANOG-201ENST00000229307 RPL36AP83881 106 aaKnown RBP6.35□□□□□ -1.39
NANOG-201ENST00000229307 DIAPH2-AS1Q14236 149 aa6.35□□□□□ -1.39
NANOG-201ENST00000229307 RPL36ALQ969Q0 106 aaKnown RBP6.35□□□□□ -1.39
NANOG-201ENST00000229307 CA1P00915 261 aaPredicted RBP6.34□□□□□ -1.39
NANOG-201ENST00000229307 INSL3P51460 131 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 TRAV12-3A0A0B4J271 114 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 TCRAP04437 139 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 C5orf56Q8N8D9 126 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 ATP6V0BQ99437 205 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 BRCA2P51587 3418 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 M0R3E3 92 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 PPBPP02775 128 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 SUMO2P61956 95 aaKnown RBP6.34□□□□□ -1.39
NANOG-201ENST00000229307 CFAP161Q6P656 301 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 ISOC2Q96AB3 205 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 FGF23Q9GZV9 251 aaPredicted RBP6.34□□□□□ -1.39
NANOG-201ENST00000229307 OSTCQ9NRP0 149 aa6.34□□□□□ -1.39
NANOG-201ENST00000229307 TP53BP1Q12888 1972 aaPredicted RBP6.34□□□□□ -1.39
NANOG-201ENST00000229307 IZUMO1RA6ND01 250 aa6.34□□□□□ -1.4
NANOG-201ENST00000229307 RPL13AP40429 203 aaKnown RBP6.34□□□□□ -1.4
NANOG-201ENST00000229307 FAM90A2PQ658T7 463 aa6.34□□□□□ -1.4
NANOG-201ENST00000229307 SHISA2Q6UWI4 295 aa6.34□□□□□ -1.4
NANOG-201ENST00000229307 SPTAN1Q13813 2472 aaKnown RBP6.34□□□□□ -1.4
NANOG-201ENST00000229307 PCNX1Q96RV3 2341 aa6.34□□□□□ -1.4
NANOG-201ENST00000229307 POLEQ07864 2286 aa6.34□□□□□ -1.4
NANOG-201ENST00000229307 LRP4O75096 1905 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 SCGB1C2P0DMR2 95 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 Q8N7P7 452 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 SPAG8Q99932 426 aaPredicted RBP6.33□□□□□ -1.4
NANOG-201ENST00000229307 PKD1L2Q7Z442 2459 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 A0A087WX48 190 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 A0A0G2JRQ6 117 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 INAFM1C9JVW0 142 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 SRP19P09132 144 aaKnown RBP6.33□□□□□ -1.4
NANOG-201ENST00000229307 MALP21145 153 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 C8orf86Q6ZUL3 223 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 ZNF502Q8TBZ5 544 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 AKAP6Q13023 2319 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 A6NDX4 124 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 CIDEAO60543 219 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 MORN3Q6PF18 240 aaPredicted RBP6.33□□□□□ -1.4
NANOG-201ENST00000229307 NDUFA11Q86Y39 141 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 ORMDL3Q8N138 153 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 EXOC3-AS1Q8N2X6 119 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 C4orf3Q8WVX3 66 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 TMEM70Q9BUB7 260 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 WFDC1Q9HC57 220 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 ANKRD11Q6UB99 2663 aaPredicted RBP6.33□□□□□ -1.4
NANOG-201ENST00000229307 TRAV1-1A0A0B4J248 108 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 M0R143 59 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 LY6G6DO95868 133 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 LGALS3P17931 250 aaKnown RBP6.33□□□□□ -1.4
NANOG-201ENST00000229307 FXYD7P58549 80 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 GCSAMLQ5JQS6 135 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 Q6YL49 198 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 Q6ZRM9 215 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 CHCHD5Q9BSY4 110 aa6.33□□□□□ -1.4
NANOG-201ENST00000229307 IGHV7-81A0A0B4J1V7 117 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 TRAV8-6A0A0B4J262 113 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 ATP5LO75964 103 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 HNRNPA3P51991 378 aaKnown RBP6.32□□□□□ -1.4
NANOG-201ENST00000229307 WT1-ASQ06250 92 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 SRSF9Q13242 221 aaKnown RBP eCLIP6.32□□□□□ -1.4
NANOG-201ENST00000229307 SMPXQ9UHP9 88 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 SELENOKQ9Y6D0 94 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 CRXO43186 299 aaPredicted RBP6.32□□□□□ -1.4
NANOG-201ENST00000229307 GP9P14770 177 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 SRSF4Q08170 494 aaKnown RBP6.32□□□□□ -1.4
NANOG-201ENST00000229307 DMRTA1Q5VZB9 504 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 RHODO00212 210 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 PSCAO43653 123 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 IGLV1-47P01700 117 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 IGHG2P01859 326 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 FOLR2P14207 255 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 MSMPQ1L6U9 139 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 THAP8Q8NA92 274 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 LY6G5BQ8NDX9 201 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 MED13Q9UHV7 2174 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 YLPM1P49750 1951 aaKnown RBP6.32□□□□□ -1.4
NANOG-201ENST00000229307 ZNF114Q8NC26 417 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 MEGF9Q9H1U4 602 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
NANOG-201ENST00000229307 TMEM14CQ9P0S9 112 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 XCL2Q9UBD3 114 aa6.32□□□□□ -1.4
NANOG-201ENST00000229307 MRPS16Q9Y3D3 137 aaKnown RBP6.32□□□□□ -1.4
NANOG-201ENST00000229307 H3BVH4 76 aa6.31□□□□□ -1.4
NANOG-201ENST00000229307 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
NANOG-201ENST00000229307 IFI27P40305 119 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms