RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 HARBI1Q96MB7 349 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 TCRBV4S1A1TA0A5B7 111 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 GAGE12HA6NDE8 117 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 ZNF785A8K8V0 405 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 D6R8Y8 96 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 SLC25A48Q6ZT89 311 aaKnown RBP11.22□□□□□ -0.61
SF1-201ENST00000227503 SIGLEC8Q9NYZ4 499 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 TNFAIP6P98066 277 aaPredicted RBP11.22□□□□□ -0.61
SF1-201ENST00000227503 DIAPH2-AS1Q14236 149 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 C22orf34Q6ZV56 151 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
SF1-201ENST00000227503 OR5A1Q8NGJ0 315 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 OR1L4Q8NGR5 311 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 OR1L8Q8NGR8 309 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 POLEQ07864 2286 aa11.21□□□□□ -0.61
SF1-201ENST00000227503 TMEM213A2RRL7 107 aa11.21□□□□□ -0.61
SF1-201ENST00000227503 ETDBQ3ZM63 59 aa11.21□□□□□ -0.61
SF1-201ENST00000227503 ATP6V0BQ99437 205 aa11.21□□□□□ -0.61
SF1-201ENST00000227503 MRPL20Q9BYC9 149 aaKnown RBP11.21□□□□□ -0.61
SF1-201ENST00000227503 NHP2Q9NX24 153 aaKnown RBP11.21□□□□□ -0.61
SF1-201ENST00000227503 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.61
SF1-201ENST00000227503 KLF12Q9Y4X4 402 aa11.21□□□□□ -0.61
SF1-201ENST00000227503 TRAV26-1A0A087WT03 109 aa11.21□□□□□ -0.62
SF1-201ENST00000227503 A0A1B0GUT8 65 aa11.21□□□□□ -0.62
SF1-201ENST00000227503 CGB1A6NKQ9 187 aa11.21□□□□□ -0.62
SF1-201ENST00000227503 APOBEC3AP31941 199 aaPredicted RBP11.21□□□□□ -0.62
SF1-201ENST00000227503 LCNL1Q6ZST4 164 aa11.21□□□□□ -0.62
SF1-201ENST00000227503 Q86TA4 180 aa11.21□□□□□ -0.62
SF1-201ENST00000227503 TPSG1Q9NRR2 321 aa11.21□□□□□ -0.62
SF1-201ENST00000227503 HAX1O00165 279 aa11.2□□□□□ -0.62
SF1-201ENST00000227503 ERHP84090 104 aaKnown RBP11.2□□□□□ -0.62
SF1-201ENST00000227503 AMN1Q8IY45 258 aa11.2□□□□□ -0.62
SF1-201ENST00000227503 ZNF292O60281 2723 aa11.2□□□□□ -0.62
SF1-201ENST00000227503 TM4SF5O14894 197 aa11.2□□□□□ -0.62
SF1-201ENST00000227503 ZGRF1Q86YA3 2104 aa11.2□□□□□ -0.62
SF1-201ENST00000227503 PIEZO2Q9H5I5 2752 aa11.2□□□□□ -0.62
SF1-201ENST00000227503 SMIM13P0DJ93 91 aa11.19□□□□□ -0.62
SF1-201ENST00000227503 PPIFP30405 207 aaKnown RBP11.19□□□□□ -0.62
SF1-201ENST00000227503 OR5AN1Q8NGI8 311 aa11.19□□□□□ -0.62
SF1-201ENST00000227503 ZNF414Q96IQ9 312 aa11.19□□□□□ -0.62
SF1-201ENST00000227503 C17orf77Q96MU5 243 aa11.19□□□□□ -0.62
SF1-201ENST00000227503 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
SF1-201ENST00000227503 ADGRG4Q8IZF6 3080 aa11.19□□□□□ -0.62
SF1-201ENST00000227503 H3BMG7 143 aa11.19□□□□□ -0.62
SF1-201ENST00000227503 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
SF1-201ENST00000227503 A0A1B0GV72 72 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 C16orf97H3BN30 126 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 ATP5IP56385 69 aaPredicted RBP11.18□□□□□ -0.62
SF1-201ENST00000227503 CKS1BP61024 79 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 TMEM30BQ3MIR4 351 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 TEX36Q5VZQ5 186 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 SOX21Q9Y651 276 aaPredicted RBP11.18□□□□□ -0.62
SF1-201ENST00000227503 ZNF833PQ6ZTB9 187 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 FAM27E3Q08E93 113 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 CT83Q5H943 113 aa11.18□□□□□ -0.62
SF1-201ENST00000227503 SPAG8Q99932 426 aaPredicted RBP11.18□□□□□ -0.62
SF1-201ENST00000227503 IGLV2-11P01706 119 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 GP9P14770 177 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 CD300EQ496F6 205 aaPredicted RBP11.17□□□□□ -0.62
SF1-201ENST00000227503 IGFL3Q6UXB1 125 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 OR9G4Q8NGQ1 327 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 RITA1Q96K30 269 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 VGLL1Q99990 258 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 SPANXB1Q9NS25 103 aaPredicted RBP11.17□□□□□ -0.62
SF1-201ENST00000227503 SSUH2Q9Y2M2 353 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 CD40P25942 277 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 PRB3Q04118 309 aaPredicted RBP11.17□□□□□ -0.62
SF1-201ENST00000227503 GFRA4Q9GZZ7 299 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 SMPXQ9UHP9 88 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 LINC00312Q9Y6C7 94 aa11.17□□□□□ -0.62
SF1-201ENST00000227503 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 GAS8-AS1O95177 125 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 CRYBA4P53673 196 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 OR4X2Q8NGF9 303 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 IFI27L1Q96BM0 104 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 PRELID3AQ96N28 172 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 CUL9Q8IWT3 2517 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 NPIPB6E9PJ23 425 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 LYZP61626 148 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 IGF2-ASQ6U949 168 aa11.16□□□□□ -0.62
SF1-201ENST00000227503 FCN3O75636 299 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 CRIP1P50238 77 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 LGALS9BQ3B8N2 356 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 Q6ZS92 163 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 GTSCR1Q86UQ5 136 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
SF1-201ENST00000227503 C8orf49Q96NF6 230 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 A0A1W2PPI3 338 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 SLC25A17O43808 307 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 RIGQ13278 110 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 CHAC1Q9BUX1 264 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 SH3BGRL2Q9UJC5 107 aa11.15□□□□□ -0.62
SF1-201ENST00000227503 M0R3E3 92 aa11.14□□□□□ -0.63
SF1-201ENST00000227503 CCL3L1P16619 93 aa11.14□□□□□ -0.63
SF1-201ENST00000227503 MUC6Q6W4X9 2439 aa11.14□□□□□ -0.63
SF1-201ENST00000227503 CEP295Q9C0D2 2601 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms