RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 RPRMQ9NS64 109 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 RFNGQ9Y644 331 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 C3orf84H3BNL1 204 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 H3BQ15 152 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 GIPP09681 153 aaPredicted RBP9.24□□□□□ -0.93
LSM5-201ENST00000223084 ZNF705DP0CH99 300 aaPredicted RBP9.24□□□□□ -0.93
LSM5-201ENST00000223084 ZNF705BP0CI00 300 aaPredicted RBP9.24□□□□□ -0.93
LSM5-201ENST00000223084 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 EBLN2Q6P2I7 272 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 BPIFA4PQ86YQ2 179 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 ZNF709Q8N972 641 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 OR4B1Q8NGF8 309 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 LRRC20Q8TCA0 184 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 XCL2Q9UBD3 114 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 RNF24Q9Y225 148 aa9.24□□□□□ -0.93
LSM5-201ENST00000223084 A0A0J9YX75 114 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 SLC17A3O00476 420 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 DEFB4AO15263 64 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 IFNA5P01569 189 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 IGLC2P0DOY2 106 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 CASC10Q5T4H9 136 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 FAM78BQ5VT40 261 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 ZNF738Q8NE65 137 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 SCGB1C1Q8TD33 95 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 SLC35B3Q9H1N7 401 aa9.23□□□□□ -0.93
LSM5-201ENST00000223084 C17orf112F2Z3M2 114 aa9.22□□□□□ -0.93
LSM5-201ENST00000223084 NUTF2P61970 127 aaKnown RBP9.22□□□□□ -0.93
LSM5-201ENST00000223084 PSG3Q16557 428 aa9.22□□□□□ -0.93
LSM5-201ENST00000223084 FFAR4Q5NUL3 377 aa9.22□□□□□ -0.93
LSM5-201ENST00000223084 MIR17HGQ75NE6 70 aa9.22□□□□□ -0.93
LSM5-201ENST00000223084 CSNK1G2-AS1Q8NCQ2 148 aa9.22□□□□□ -0.93
LSM5-201ENST00000223084 ZNF331Q9NQX6 463 aaPredicted RBP9.22□□□□□ -0.93
LSM5-201ENST00000223084 ZNF586Q9NXT0 402 aa9.22□□□□□ -0.93
LSM5-201ENST00000223084 FXYD6-FXYD2A0A087WZ82 144 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 ZNF705FA8MVS1 300 aaPredicted RBP9.21□□□□□ -0.94
LSM5-201ENST00000223084 PYYP10082 97 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 CXCL2P19875 107 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 CNN1P51911 297 aaKnown RBP9.21□□□□□ -0.94
LSM5-201ENST00000223084 PSG9Q00887 426 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 TMEM41BQ5BJD5 291 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 LCN15Q6UWW0 184 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 OR2T35Q8NGX2 323 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 ASB13Q8WXK3 278 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 SAT2Q96F10 170 aaPredicted RBP9.21□□□□□ -0.94
LSM5-201ENST00000223084 AQP10Q96PS8 301 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 SLC50A1Q9BRV3 221 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 SLC25A2Q9BXI2 301 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 HRH4Q9H3N8 390 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 KCNIP2Q9NS61 270 aa9.21□□□□□ -0.94
LSM5-201ENST00000223084 G3V3Q6 166 aa9.2□□□□□ -0.94
LSM5-201ENST00000223084 SMLR1H3BR10 107 aa9.2□□□□□ -0.94
LSM5-201ENST00000223084 IL17DQ8TAD2 202 aa9.2□□□□□ -0.94
LSM5-201ENST00000223084 RPUSD4Q96CM3 377 aaKnown RBP9.2□□□□□ -0.94
LSM5-201ENST00000223084 FAM167A-AS1Q96KT0 104 aa9.2□□□□□ -0.94
LSM5-201ENST00000223084 CLUHP3Q96NS8 147 aa9.2□□□□□ -0.94
LSM5-201ENST00000223084 PARD6GQ9BYG4 376 aaPredicted RBP9.2□□□□□ -0.94
LSM5-201ENST00000223084 MFFQ9GZY8 342 aa9.2□□□□□ -0.94
LSM5-201ENST00000223084 X6R8D5 127 aa9.2□□□□□ -0.94
LSM5-201ENST00000223084 A8MTW9 85 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 PRAC2D3DTV9 90 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 EIF3GO75821 320 aaKnown RBP eCLIP9.19□□□□□ -0.94
LSM5-201ENST00000223084 DUSP14O95147 198 aaKnown RBP9.19□□□□□ -0.94
LSM5-201ENST00000223084 HIST1H1AQ02539 215 aaPredicted RBP9.19□□□□□ -0.94
LSM5-201ENST00000223084 AMTNQ6UX39 209 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 Q8NAQ8 132 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 OR8A1Q8NGG7 326 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 BLNKQ8WV28 456 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 C1QTNF4Q9BXJ3 329 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 TMEM14CQ9P0S9 112 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 FUT9Q9Y231 359 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 STARD9Q9P2P6 4700 aa9.19□□□□□ -0.94
LSM5-201ENST00000223084 TRBV19A0A075B6N1 114 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 IGHV3OR16-12A0A075B7B8 117 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 IGHV4-28A0A0C4DH34 117 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 RNF222A6NCQ9 220 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 ZNF705EA8MWA4 302 aaPredicted RBP9.18□□□□□ -0.94
LSM5-201ENST00000223084 M0R2Z0 102 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 NDUFB4O95168 129 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 RBMY1A1P0DJD3 496 aaKnown RBP9.18□□□□□ -0.94
LSM5-201ENST00000223084 RBMY1CP0DJD4 496 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 HIST1H1EP10412 219 aaKnown RBP9.18□□□□□ -0.94
LSM5-201ENST00000223084 PMS2P11Q13670 270 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 RBMY1FQ15415 496 aaKnown RBP9.18□□□□□ -0.94
LSM5-201ENST00000223084 GUK1Q16774 197 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 HSD17B11Q8NBQ5 300 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 INO80EQ8NBZ0 244 aaPredicted RBP9.18□□□□□ -0.94
LSM5-201ENST00000223084 MRPL32Q9BYC8 188 aaKnown RBP9.18□□□□□ -0.94
LSM5-201ENST00000223084 TNFSF18Q9UNG2 199 aa9.18□□□□□ -0.94
LSM5-201ENST00000223084 OR10J4P0C629 311 aa9.17□□□□□ -0.94
LSM5-201ENST00000223084 RAB2AP61019 212 aa9.17□□□□□ -0.94
LSM5-201ENST00000223084 RHOBP62745 196 aa9.17□□□□□ -0.94
LSM5-201ENST00000223084 SPINK13Q1W4C9 94 aa9.17□□□□□ -0.94
LSM5-201ENST00000223084 ZNF503Q96F45 646 aa9.17□□□□□ -0.94
LSM5-201ENST00000223084 PAXXQ9BUH6 204 aa9.17□□□□□ -0.94
LSM5-201ENST00000223084 OR51M1Q9H341 326 aa9.17□□□□□ -0.94
LSM5-201ENST00000223084 C11orf68Q9H3H3 251 aaKnown RBP9.17□□□□□ -0.94
LSM5-201ENST00000223084 TIMM9Q9Y5J7 89 aa9.17□□□□□ -0.94
LSM5-201ENST00000223084 TRAV12-2A0A075B6T6 113 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 CXorf65A6NEN9 183 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 M0R3E3 92 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms