RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RASL11AQ6T310 242 aa11.51□□□□□ -0.57
CNOT3-201ENST00000221232 ARMS2P0C7Q2 107 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 RPLP1P05386 114 aaKnown RBP11.5□□□□□ -0.57
CNOT3-201ENST00000221232 CTRLP40313 264 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 FANCD2OSQ96PS1 177 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 LPAR2Q9HBW0 351 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 A0A1W2PPR1 153 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 NDUFB8O95169 186 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 PMCHL2Q9BQD1 86 aa11.5□□□□□ -0.57
CNOT3-201ENST00000221232 IGLC2P0DOY2 106 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 IGLC3P0DOY3 106 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 CEACAM3P40198 252 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 CRIP1P50238 77 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 ATP5L2Q7Z4Y8 100 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 TMEM208Q9BTX3 173 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 SERTM2A0A1B0GWG4 89 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 H3BRN7 92 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
CNOT3-201ENST00000221232 KLF5Q13887 457 aaPredicted RBP11.49□□□□□ -0.57
CNOT3-201ENST00000221232 FAM120AOSQ5T036 256 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 OR11H6Q8NGC7 330 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 ZNF414Q96IQ9 312 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 TMEM14CQ9P0S9 112 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
CNOT3-201ENST00000221232 VPS13CQ709C8 3753 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 IGKV2-40A0A087WW87 121 aaPredicted RBP11.48□□□□□ -0.57
CNOT3-201ENST00000221232 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 IGKV2D-40P01614 121 aaPredicted RBP11.48□□□□□ -0.57
CNOT3-201ENST00000221232 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 LY6DQ14210 128 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 Q6ZVH6 145 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 ARPC1AQ92747 370 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 C2orf70A6NJV1 201 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 PRTN3P24158 256 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 HINT1P49773 126 aaPredicted RBP11.48□□□□□ -0.57
CNOT3-201ENST00000221232 RNASE8Q8TDE3 154 aaKnown RBP11.48□□□□□ -0.57
CNOT3-201ENST00000221232 RNF5Q99942 180 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
CNOT3-201ENST00000221232 MFAP4P55083 255 aa11.47□□□□□ -0.57
CNOT3-201ENST00000221232 UQCR10Q9UDW1 63 aa11.47□□□□□ -0.57
CNOT3-201ENST00000221232 IGHV1-24A0A0C4DH33 117 aa11.47□□□□□ -0.57
CNOT3-201ENST00000221232 LINC00614P0C842 121 aa11.47□□□□□ -0.57
CNOT3-201ENST00000221232 IGLL1P15814 213 aa11.47□□□□□ -0.57
CNOT3-201ENST00000221232 KLRB1Q12918 225 aa11.47□□□□□ -0.57
CNOT3-201ENST00000221232 Q8TAT8 98 aa11.47□□□□□ -0.57
CNOT3-201ENST00000221232 LOC102724200A0A096LPH7 203 aaPredicted RBP11.46□□□□□ -0.57
CNOT3-201ENST00000221232 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 TMUB1Q9BVT8 246 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 UBTD1Q9HAC8 227 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 MSRB2Q9Y3D2 182 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.46□□□□□ -0.57
CNOT3-201ENST00000221232 FXYD7P58549 80 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 PSG3Q16557 428 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 FBXL19-AS1Q494R0 122 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 STPG4Q8N801 248 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 SMIM12Q96EX1 92 aa11.46□□□□□ -0.57
CNOT3-201ENST00000221232 HIVEP3Q5T1R4 2406 aa11.46□□□□□ -0.58
CNOT3-201ENST00000221232 hDV102S1A0JD36 115 aa11.46□□□□□ -0.58
CNOT3-201ENST00000221232 F8W735 103 aaPredicted RBP11.46□□□□□ -0.58
CNOT3-201ENST00000221232 K7EQM0 130 aa11.46□□□□□ -0.58
CNOT3-201ENST00000221232 M0QZK8 103 aa11.46□□□□□ -0.58
CNOT3-201ENST00000221232 LEPROTL1O95214 131 aa11.46□□□□□ -0.58
CNOT3-201ENST00000221232 ECSCRQ19T08 205 aa11.46□□□□□ -0.58
CNOT3-201ENST00000221232 NPBQ8NG41 125 aa11.46□□□□□ -0.58
CNOT3-201ENST00000221232 C1RLQ9NZP8 487 aa11.46□□□□□ -0.58
CNOT3-201ENST00000221232 IGHV3OR16-10A0A075B7F0 116 aa11.45□□□□□ -0.58
CNOT3-201ENST00000221232 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
CNOT3-201ENST00000221232 A0A1B0GUT8 65 aa11.45□□□□□ -0.58
CNOT3-201ENST00000221232 NDUFA3O95167 84 aa11.45□□□□□ -0.58
CNOT3-201ENST00000221232 ZNF562Q6V9R5 426 aa11.45□□□□□ -0.58
CNOT3-201ENST00000221232 TMEM70Q9BUB7 260 aa11.45□□□□□ -0.58
CNOT3-201ENST00000221232 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
CNOT3-201ENST00000221232 IGLV11-55A0A075B6I3 123 aa11.45□□□□□ -0.58
CNOT3-201ENST00000221232 WI2-2373I1.2A0A1W2PRP0 233 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 TMEM213A2RRL7 107 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 ODF3BA8MYP8 253 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 NPIPB6E9PJ23 425 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 MRPS12O15235 138 aaKnown RBP11.44□□□□□ -0.58
CNOT3-201ENST00000221232 CT83Q5H943 113 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 OR4C46A6NHA9 309 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 APOHP02749 345 aaPredicted RBP11.44□□□□□ -0.58
CNOT3-201ENST00000221232 PAX2Q02962 417 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 C11orf71Q6IPW1 123 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 LAMTOR2Q9Y2Q5 125 aa11.44□□□□□ -0.58
CNOT3-201ENST00000221232 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 LINC01548A6NM66 108 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 NPIPB5A8MRT5 1133 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 FAM106CPP0CH98 169 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 TCTAP57738 103 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 FAM106AQ4KMX7 169 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 KLHDC1Q8N7A1 406 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 GFRA4Q9GZZ7 299 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms