RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 IGKV3-7A0A075B6H7 116 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 SPAARA0A1B0GVQ0 90 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 C3orf79P0CE67 100 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 TPTE2P1Q5T6R2 138 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 PRADC1Q9BSG0 188 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 IGLV3-1P01715 115 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 PSG1P11464 419 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 CFHR2P36980 270 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 FOXF2Q12947 444 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 ZNF664Q8N3J9 261 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 MDS2Q8NDY4 140 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 MALRD1Q5VYJ5 2156 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 TRAV41A0A0B4J266 112 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 MLNRO43193 412 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 SNRPCP09234 159 aaKnown RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 COX8AP10176 69 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 TRPT1Q86TN4 253 aaKnown RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 ZNF837Q96EG3 531 aaPredicted RBP3.61□□□□□ -1.83
CHD9-201ENST00000219084 LINC01587Q99440 93 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 NDUFA4L2Q9NRX3 87 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 DEPPQ9NTK1 212 aa3.61□□□□□ -1.83
CHD9-201ENST00000219084 COL6A6A6NMZ7 2263 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 A0A1W2PRD5 423 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 A0A1W2PRF3 423 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 A0A1W2PRM7 423 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 SH2D1AO60880 128 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 PYYP10082 97 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 SRD5A1P18405 259 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 OCIAD2Q56VL3 154 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 TMEM200BQ69YZ2 307 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 THAP8Q8NA92 274 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 PPDPFLQ8WWR9 84 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 VWCEQ96DN2 955 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 MRPL53Q96EL3 112 aaKnown RBP3.6□□□□□ -1.83
CHD9-201ENST00000219084 PYGO2Q9BRQ0 406 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 SIGLEC9Q9Y336 463 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 MUC22E2RYF6 1773 aaPredicted RBP3.6□□□□□ -1.83
CHD9-201ENST00000219084 EPOPA6NHQ4 379 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 RNASE2P10153 161 aaKnown RBP3.6□□□□□ -1.83
CHD9-201ENST00000219084 B3GALT5-AS1P59052 145 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 C15orf32Q32M92 178 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 Q8N8P6 123 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 LENEPQ9Y5L5 61 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 INSP01308 110 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 PFN1P07737 140 aaKnown RBP3.6□□□□□ -1.83
CHD9-201ENST00000219084 CELA3AP09093 270 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 UTF1Q5T230 341 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 STHQ8IWL8 128 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 OR13C6PQ8NH95 151 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 VSIRQ9H7M9 311 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 PGPEP1Q9NXJ5 209 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 DSCAML1Q8TD84 2053 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 NPIPB5A8MRT5 1133 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 C20orf78Q9BR46 151 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 KLF12Q9Y4X4 402 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 ROS1P08922 2347 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 PSMB11A5LHX3 300 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 H3BMM0 161 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 GTSCR1Q86UQ5 136 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 ZNF114Q8NC26 417 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 ST6GALNAC3Q8NDV1 305 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 POU2AF1Q16633 256 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 LYZL1Q6UWQ5 148 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 RNF152Q8N8N0 203 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 C18orf32Q8TCD1 76 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 GAFA1Q96PS6 74 aa3.6□□□□□ -1.83
CHD9-201ENST00000219084 POLR3KQ9Y2Y1 108 aaPredicted RBP3.6□□□□□ -1.83
CHD9-201ENST00000219084 H3BUA1 57 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 NTF4P34130 210 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 GLMPQ8WWB7 406 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 PMS2P5A8MQ11 134 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 K7EP34 96 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 PF4P02776 101 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 ACYP1P07311 99 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 LCN12Q6JVE5 192 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 VMO1Q7Z5L0 202 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 ST6GALNAC6Q969X2 333 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 TIMM23O14925 209 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 TEX36Q5VZQ5 186 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 FAM104BQ5XKR9 115 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 CD177Q8N6Q3 437 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 TIMM21Q9BVV7 248 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 ADAMTS20P59510 1910 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 TRAV5A0A0B4J249 113 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 IGHV4-39P01824 125 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 TDGF1P13385 188 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 LY6G5BQ8NDX9 201 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 ATP6V0BQ99437 205 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 KIR2DL5BA0A0G2JN68 375 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 KIR2DL5BA0A0G2JPC4 375 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 TMEM213A2RRL7 107 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 C22orf46C9J442 243 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 ZNHIT1O43257 154 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 KIR2DL5AQ8N109 375 aa3.59□□□□□ -1.83
CHD9-201ENST00000219084 DAZ1Q9NQZ3 744 aaKnown RBP3.59□□□□□ -1.83
CHD9-201ENST00000219084 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.59□□□□□ -1.841e-6■■■■□ 25.3
CHD9-201ENST00000219084 LINC00473A8K010 186 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 ADARB2-AS1A8MUL3 147 aa3.59□□□□□ -1.84
CHD9-201ENST00000219084 HLA-DMBP28068 263 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms