RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 PRR20BP86481 221 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 PRR20AP86496 221 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 LEMD1Q68G75 181 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 UHRF2Q96PU4 802 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 SCRT1Q9BWW7 348 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 NPCDR1Q9BY65 106 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 SMIM3Q9BZL3 60 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 ARV1Q9H2C2 271 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 SLC25A32Q9H2D1 315 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 NRN1Q9NPD7 142 aa6.59□□□□□ -1.35
NECAP1-212ENST00000638787 STAB2Q8WWQ8 2551 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 NBEAL2Q6ZNJ1 2754 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 LINC00862A6NCI5 91 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 RBMY1BA6NDE4 496 aaKnown RBP6.58□□□□□ -1.36
NECAP1-212ENST00000638787 RBMY1EA6NEQ0 496 aaKnown RBP6.58□□□□□ -1.36
NECAP1-212ENST00000638787 COX7A2P2O60397 106 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 RBMY1DP0C7P1 496 aaKnown RBP6.58□□□□□ -1.36
NECAP1-212ENST00000638787 B2MP61769 119 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 LINC00322Q6ZN03 302 aaPredicted RBP6.58□□□□□ -1.36
NECAP1-212ENST00000638787 S100A7AQ86SG5 101 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 APRG1Q8IVJ8 170 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 ZNF680Q8NEM1 530 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 OR2T35Q8NGX2 323 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 WDR61Q9GZS3 305 aaKnown RBP6.58□□□□□ -1.36
NECAP1-212ENST00000638787 SLC39A9Q9NUM3 307 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 TENM3Q9P273 2699 aa6.58□□□□□ -1.36
NECAP1-212ENST00000638787 ELOA3CA0A087WX78 387 aaPredicted RBP6.57□□□□□ -1.36
NECAP1-212ENST00000638787 ZNF688P0C7X2 276 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 NHLRC4P0CG21 123 aaPredicted RBP6.57□□□□□ -1.36
NECAP1-212ENST00000638787 M6PRP20645 277 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 GALR1P47211 349 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 DEFB131AP59861 70 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 ZNF124Q15973 351 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 HAGHQ16775 308 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 C10orf113Q5VZT2 155 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 Q6ZRG5 221 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 TMEM37Q8WXS4 190 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 GPR82Q96P67 336 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 WFDC1Q9HC57 220 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 PXMP4Q9Y6I8 212 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 FXYD6-FXYD2A0A087WZ82 144 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 SMLR1H3BR10 107 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 IFNA5P01569 189 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 LINC00305Q7Z4B0 112 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 OR1L4Q8NGR5 311 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 AQP10Q96PS8 301 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 DNAJC4Q9NNZ3 241 aa6.57□□□□□ -1.36
NECAP1-212ENST00000638787 LOC102724200A0A096LPH7 203 aaPredicted RBP6.56□□□□□ -1.36
NECAP1-212ENST00000638787 G3V3Q6 166 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 RPL7P18124 248 aaKnown RBP6.56□□□□□ -1.36
NECAP1-212ENST00000638787 SNRPD3P62318 126 aaKnown RBP6.56□□□□□ -1.36
NECAP1-212ENST00000638787 LGALSLQ3ZCW2 172 aaPredicted RBP6.56□□□□□ -1.36
NECAP1-212ENST00000638787 PSMG4Q5JS54 123 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 CCDC28AQ8IWP9 274 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 ZNF709Q8N972 641 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 OR11H4Q8NGC9 324 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 PFDN5Q99471 154 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 RSG1Q9BU20 258 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 SEPSECSQ9HD40 501 aaKnown RBP6.56□□□□□ -1.36
NECAP1-212ENST00000638787 KCNIP2Q9NS61 270 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 RNF24Q9Y225 148 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 C17orf112F2Z3M2 114 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 SOCS3O14543 225 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 ATF4P18848 351 aaPredicted RBP6.56□□□□□ -1.36
NECAP1-212ENST00000638787 MEOX2P50222 304 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 RAB14P61106 215 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 CLLU1Q5K131 121 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 MORN5Q5VZ52 161 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 INO80EQ8NBZ0 244 aaPredicted RBP6.56□□□□□ -1.36
NECAP1-212ENST00000638787 SCGB1C1Q8TD33 95 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 C17orf77Q96MU5 243 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 PARD6GQ9BYG4 376 aaPredicted RBP6.56□□□□□ -1.36
NECAP1-212ENST00000638787 TNFSF18Q9UNG2 199 aa6.56□□□□□ -1.36
NECAP1-212ENST00000638787 RNF222A6NCQ9 220 aa6.55□□□□□ -1.36
NECAP1-212ENST00000638787 RPL35AP18077 110 aaKnown RBP6.55□□□□□ -1.36
NECAP1-212ENST00000638787 GCSAMLQ5JQS6 135 aa6.55□□□□□ -1.36
NECAP1-212ENST00000638787 SAMD13Q5VXD3 122 aa6.55□□□□□ -1.36
NECAP1-212ENST00000638787 GATAD1Q8WUU5 269 aa6.55□□□□□ -1.36
NECAP1-212ENST00000638787 TM2D3Q9BRN9 247 aa6.55□□□□□ -1.36
NECAP1-212ENST00000638787 AGRNO00468 2067 aa6.55□□□□□ -1.36
NECAP1-212ENST00000638787 ISLRO14498 428 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 MRPS12O15235 138 aaKnown RBP6.54□□□□□ -1.36
NECAP1-212ENST00000638787 ID1P41134 155 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 PSMB3P49720 205 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 BPIFA4PQ86YQ2 179 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 C16orf92Q96LL3 132 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 ZMAT4Q9H898 229 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 A0A087X0K7 114 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 TRAV5A0A0B4J249 113 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 KNCNA6PVL3 124 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 HMSDA8MTL9 139 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 APOC4P55056 127 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 ZNF266Q14584 549 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 STHQ8IWL8 128 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 LINC00052Q96N35 136 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 SPATA25Q9BR10 227 aa6.54□□□□□ -1.36
NECAP1-212ENST00000638787 KIR2DL5BA0A0G2JN68 375 aa6.53□□□□□ -1.36
NECAP1-212ENST00000638787 KIR2DL5BA0A0G2JPC4 375 aa6.53□□□□□ -1.36
NECAP1-212ENST00000638787 ARPC5O15511 151 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms