RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 MORN5Q5VZ52 161 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 CSMD3Q7Z407 3707 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 TRPT1Q86TN4 253 aaKnown RBP9.18□□□□□ -0.94
CLN6-225ENST00000638144 KIR2DL5AQ8N109 375 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 OR11H7Q8NGC8 314 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 OR5C1Q8NGR4 320 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 KIR2DL5BQ8NHK3 375 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 MUC7Q8TAX7 377 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 C20orf173Q96LM9 149 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 ARV1Q9H2C2 271 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 F6UB75 175 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 H3BTX0 84 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 UBE2CO00762 179 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 COX7A2P2O60397 106 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 IGKV3-20P01619 116 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 Q6ZWC4 215 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 RNF182Q8N6D2 247 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 TMEM37Q8WXS4 190 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 RNF183Q96D59 192 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 C16orf92Q96LL3 132 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 SMIM3Q9BZL3 60 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 MED28Q9H204 178 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
CLN6-225ENST00000638144 A0A0J9YWU9 116 aa9.16□□□□□ -0.94
CLN6-225ENST00000638144 GIG44P09565 113 aaPredicted RBP9.16□□□□□ -0.94
CLN6-225ENST00000638144 ATF4P18848 351 aaPredicted RBP9.16□□□□□ -0.94
CLN6-225ENST00000638144 PSMB3P49720 205 aa9.16□□□□□ -0.94
CLN6-225ENST00000638144 OPCMLQ14982 345 aa9.16□□□□□ -0.94
CLN6-225ENST00000638144 RGS21Q2M5E4 152 aa9.16□□□□□ -0.94
CLN6-225ENST00000638144 LINC00305Q7Z4B0 112 aa9.16□□□□□ -0.94
CLN6-225ENST00000638144 SLC25A31Q9H0C2 315 aa9.16□□□□□ -0.94
CLN6-225ENST00000638144 PXMP4Q9Y6I8 212 aa9.16□□□□□ -0.94
CLN6-225ENST00000638144 STARD9Q9P2P6 4700 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 TRAV8-2A0A0B4J237 113 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 TRAV5A0A0B4J249 113 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 LYL1P12980 280 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 HLA-DMBP28068 263 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 ID1P41134 155 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 FXYD7P58549 80 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 B2MP61769 119 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 PRR20EP86478 221 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 PRR20CP86479 221 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 PRR20DP86480 221 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 PRR20BP86481 221 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 PRR20AP86496 221 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 RAB31Q13636 194 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 GCSAMLQ5JQS6 135 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 C10orf113Q5VZT2 155 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 NPCDR1Q9BY65 106 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 SLC39A9Q9NUM3 307 aa9.15□□□□□ -0.94
CLN6-225ENST00000638144 H3BMM0 161 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 ISLRO14498 428 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 DEFB4AO15263 64 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 PET100P0DJ07 73 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 HLA-DRB4P13762 266 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 RPL7P18124 248 aaKnown RBP9.14□□□□□ -0.95
CLN6-225ENST00000638144 RPL12P30050 165 aaKnown RBP9.14□□□□□ -0.95
CLN6-225ENST00000638144 ATP6V1FQ16864 119 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 OR11H2Q8NH07 326 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 GPR82Q96P67 336 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 HSPB11Q9Y547 144 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 HLA-DRB4X5D2U9 266 aa9.14□□□□□ -0.95
CLN6-225ENST00000638144 KMT2CQ8NEZ4 4911 aaKnown RBP9.13□□□□□ -0.95
CLN6-225ENST00000638144 SLC17A3O00476 420 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 MRPS12O15235 138 aaKnown RBP9.13□□□□□ -0.95
CLN6-225ENST00000638144 ZNF705DP0CH99 300 aaPredicted RBP9.13□□□□□ -0.95
CLN6-225ENST00000638144 ZNF705BP0CI00 300 aaPredicted RBP9.13□□□□□ -0.95
CLN6-225ENST00000638144 S100A7P31151 101 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 MEOX2P50222 304 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 Q5BKY6 102 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 CASC10Q5T4H9 136 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 PXDC1Q5TGL8 231 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 Q6ZRG5 221 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 OR4B1Q8NGF8 309 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 ATP5SQ99766 215 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 RARRES2Q99969 163 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
CLN6-225ENST00000638144 SEPSECSQ9HD40 501 aaKnown RBP9.13□□□□□ -0.95
CLN6-225ENST00000638144 DNAJC4Q9NNZ3 241 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 XCL2Q9UBD3 114 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 RFNGQ9Y644 331 aa9.13□□□□□ -0.95
CLN6-225ENST00000638144 C3orf84H3BNL1 204 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 SPP1P10451 314 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 RPL29P47914 159 aaKnown RBP9.12□□□□□ -0.95
CLN6-225ENST00000638144 OXA1LQ15070 435 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 FAM78BQ5VT40 261 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 SPATA31B1PQ5VZV4 182 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 FOXI2Q6ZQN5 318 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 ZNF738Q8NE65 137 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 WDR61Q9GZS3 305 aaKnown RBP9.12□□□□□ -0.95
CLN6-225ENST00000638144 SLC35B3Q9H1N7 401 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 WFDC1Q9HC57 220 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 RPRMQ9NS64 109 aa9.12□□□□□ -0.95
CLN6-225ENST00000638144 ELOA3CA0A087WX78 387 aaPredicted RBP9.11□□□□□ -0.95
CLN6-225ENST00000638144 A0A087X0K7 114 aa9.11□□□□□ -0.95
CLN6-225ENST00000638144 A0A0J9YX75 114 aa9.11□□□□□ -0.95
CLN6-225ENST00000638144 H3BQ15 152 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms