RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 CD28P10747 220 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 ZP3P21754 424 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 UBE2G2P60604 165 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 UBE2L3P68036 154 aaKnown RBP9.02□□□□□ -0.97
CLN6-223ENST00000637823 MEF2BQ02080 365 aaPredicted RBP9.02□□□□□ -0.97
CLN6-223ENST00000637823 CST9LP1Q5W188 147 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 TMEM190Q8WZ59 177 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 NARS2Q96I59 477 aaKnown RBP9.02□□□□□ -0.97
CLN6-223ENST00000637823 GPR82Q96P67 336 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 NKX6-2Q9C056 277 aaPredicted RBP9.02□□□□□ -0.97
CLN6-223ENST00000637823 SLC35B3Q9H1N7 401 aa9.02□□□□□ -0.97
CLN6-223ENST00000637823 TSSC4Q9Y5U2 329 aaPredicted RBP9.02□□□□□ -0.97
CLN6-223ENST00000637823 IGHV4OR15-8A0A075B7B6 117 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 A0A087WW49 117 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 ZNF320A2RRD8 509 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 FAM74A7A6NL05 159 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 C9JQL5 133 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 LGALS9O00182 355 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 MRPS12O15235 138 aaKnown RBP9.01□□□□□ -0.97
CLN6-223ENST00000637823 ZNF207O43670 478 aaKnown RBP9.01□□□□□ -0.97
CLN6-223ENST00000637823 BUB3O43684 328 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 SRP19P09132 144 aaKnown RBP9.01□□□□□ -0.97
CLN6-223ENST00000637823 RPL7P18124 248 aaKnown RBP9.01□□□□□ -0.97
CLN6-223ENST00000637823 SRSF2Q01130 221 aaKnown RBP9.01□□□□□ -0.97
CLN6-223ENST00000637823 KHDC1LQ5JSQ8 128 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 UNQ9165/PRO28630Q6UXU0 137 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 C18orf65Q6ZTR6 163 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 OR8I2Q8N0Y5 310 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 KLHL30-AS1Q8NEE0 82 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 OR4F17Q8NGA8 305 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 OR1N2Q8NGR9 330 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 DPF1Q92782 380 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 OR4F4Q96R69 305 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 UFC1Q9Y3C8 167 aa9.01□□□□□ -0.97
CLN6-223ENST00000637823 YTHDF2Q9Y5A9 579 aaKnown RBP9.01□□□□□ -0.97
CLN6-223ENST00000637823 A0A1W2PS18 150 aa9□□□□□ -0.97
CLN6-223ENST00000637823 C11orf94C9JXX5 98 aa9□□□□□ -0.97
CLN6-223ENST00000637823 LINC01619G3V211 115 aa9□□□□□ -0.97
CLN6-223ENST00000637823 SFTA3P0C7M3 94 aa9□□□□□ -0.97
CLN6-223ENST00000637823 CD81P60033 236 aa9□□□□□ -0.97
CLN6-223ENST00000637823 KLF5Q13887 457 aaPredicted RBP9□□□□□ -0.97
CLN6-223ENST00000637823 C16orf54Q6UWD8 224 aa9□□□□□ -0.97
CLN6-223ENST00000637823 REC114Q7Z4M0 266 aa9□□□□□ -0.97
CLN6-223ENST00000637823 GRAMD2BQ96HH9 432 aa9□□□□□ -0.97
CLN6-223ENST00000637823 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
CLN6-223ENST00000637823 DAZ1Q9NQZ3 744 aaKnown RBP9□□□□□ -0.97
CLN6-223ENST00000637823 C2CD3Q4AC94 2353 aa9□□□□□ -0.97
CLN6-223ENST00000637823 SETD2Q9BYW2 2564 aaPredicted RBP8.99□□□□□ -0.97
CLN6-223ENST00000637823 F6UZH7 168 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 TMEM250H0YL14 139 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 H3BQ15 152 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 PDE6DO43924 150 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 APOHP02749 345 aaPredicted RBP8.99□□□□□ -0.97
CLN6-223ENST00000637823 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 HOXD3P31249 432 aaPredicted RBP8.99□□□□□ -0.97
CLN6-223ENST00000637823 GALR1P47211 349 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 FOXL1Q12952 345 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 TM4SF20Q53R12 229 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 C1QL4Q86Z23 238 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 OR11H1Q8NG94 326 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 BLNKQ8WV28 456 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 LINC00052Q96N35 136 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 SEC11CQ9BY50 192 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 ZNF586Q9NXT0 402 aa8.99□□□□□ -0.97
CLN6-223ENST00000637823 TRBV19A0A075B6N1 114 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 IGHV7-4-1A0A0J9YVY3 117 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 A8MWP6 167 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 F8W036 122 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 ATF4P18848 351 aaPredicted RBP8.98□□□□□ -0.97
CLN6-223ENST00000637823 BMI1P35226 326 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 ATP5G3P48201 142 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 SYNJ2BPP57105 145 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 RANP62826 216 aaKnown RBP8.98□□□□□ -0.97
CLN6-223ENST00000637823 SUMO1P63165 101 aaKnown RBP8.98□□□□□ -0.97
CLN6-223ENST00000637823 PDE6HQ13956 83 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 SOHLH1Q5JUK2 328 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 C10orf91Q5T1B1 145 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 CCDC28AQ8IWP9 274 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 LYPD1Q8N2G4 141 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 C11orf44Q8N8P7 122 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 ELOVL1Q9BW60 279 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 SMAD5-AS1Q9Y6J3 95 aa8.98□□□□□ -0.97
CLN6-223ENST00000637823 IGHV3OR16-13A0A075B7E8 117 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 A0A087X0K7 114 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 IGHV3-49A0A0A0MS15 119 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 IGHV3-74A0A0B4J1X5 117 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 IGHV3-66A0A0C4DH42 116 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 A0A1W2PRX2 142 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 ZNF785A8K8V0 405 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 MYCNOSP40205 109 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 MEOX2P50222 304 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 DEFB136Q30KP8 78 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 SIGLEC15Q6ZMC9 328 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 C8orf86Q6ZUL3 223 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.97□□□□□ -0.97
CLN6-223ENST00000637823 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 GLMPQ8WWB7 406 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 RAX2Q96IS3 184 aa8.97□□□□□ -0.97
CLN6-223ENST00000637823 TCEAL7Q9BRU2 100 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms