RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 SHANK2-AS3Q9BTD1 123 aa10.58□□□□□ -0.72
CACNA1A-249ENST00000637777 SLC25A31Q9H0C2 315 aa10.58□□□□□ -0.72
CACNA1A-249ENST00000637777 ARV1Q9H2C2 271 aa10.58□□□□□ -0.72
CACNA1A-249ENST00000637777 SEPSECSQ9HD40 501 aaKnown RBP10.58□□□□□ -0.72
CACNA1A-249ENST00000637777 RNF24Q9Y225 148 aa10.58□□□□□ -0.72
CACNA1A-249ENST00000637777 DNAH7Q8WXX0 4024 aa10.58□□□□□ -0.72
CACNA1A-249ENST00000637777 CXorf65A6NEN9 183 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 ISLRO14498 428 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 PET100P0DJ07 73 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 RPL7P18124 248 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 FGF7P21781 194 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 PXDC1Q5TGL8 231 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 EBLN2Q6P2I7 272 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 Q6ZRG5 221 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 OR4B1Q8NGF8 309 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 C11orf1Q9H5F2 150 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 RPRMQ9NS64 109 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 CLEC5AQ9NY25 188 aa10.57□□□□□ -0.72
CACNA1A-249ENST00000637777 PTTG1O95997 202 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 DEFB1P60022 68 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 IL15RAQ13261 267 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 ATP6V1FQ16864 119 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 TMEM41BQ5BJD5 291 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 C10orf113Q5VZT2 155 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 LINC00305Q7Z4B0 112 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 PPP1R1CQ8WVI7 109 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 OR5AC2Q9NZP5 309 aa10.56□□□□□ -0.72
CACNA1A-249ENST00000637777 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 C4BPBP20851 252 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 H2BFSP57053 126 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 FXYD7P58549 80 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 PLP1P60201 277 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 EWSR1Q01844 656 aaKnown RBP eCLIP10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 CLINT1Q14677 625 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 MIC13Q5XKP0 118 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 FOXI2Q6ZQN5 318 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 OR5C1Q8NGR4 320 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 OR1L4Q8NGR5 311 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 C1QTNF4Q9BXJ3 329 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 XCL2Q9UBD3 114 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 ALG5Q9Y673 324 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
CACNA1A-249ENST00000637777 H3BMM0 161 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 SOCS3O14543 225 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 B2MP61769 119 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 NHLH2Q02577 135 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 GDF5OSQ5U4N7 250 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 IGFL4Q6B9Z1 124 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 ZNF738Q8NE65 137 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 THAP6Q8TBB0 222 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 PFDN5Q99471 154 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 SAV1Q9H4B6 383 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 WDR83OSQ9Y284 106 aa10.54□□□□□ -0.72
CACNA1A-249ENST00000637777 ELOA3CA0A087WX78 387 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 F6UB75 175 aa10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 DEFB4AO15263 64 aa10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 SNRPCP09234 159 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 PATE2Q6UY27 113 aa10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 BPIFA4PQ86YQ2 179 aa10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 RNF182Q8N6D2 247 aa10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 ZNF709Q8N972 641 aa10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 MED28Q9H204 178 aa10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 PXMP4Q9Y6I8 212 aa10.53□□□□□ -0.72
CACNA1A-249ENST00000637777 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
CACNA1A-249ENST00000637777 MPDU1O75352 247 aa10.52□□□□□ -0.73
CACNA1A-249ENST00000637777 MPC2O95563 127 aa10.52□□□□□ -0.73
CACNA1A-249ENST00000637777 OPCMLQ14982 345 aa10.52□□□□□ -0.73
CACNA1A-249ENST00000637777 VWC2Q2TAL6 325 aa10.52□□□□□ -0.73
CACNA1A-249ENST00000637777 C20orf173Q96LM9 149 aa10.52□□□□□ -0.73
CACNA1A-249ENST00000637777 DNAJC4Q9NNZ3 241 aa10.52□□□□□ -0.73
CACNA1A-249ENST00000637777 SLC39A9Q9NUM3 307 aa10.52□□□□□ -0.73
CACNA1A-249ENST00000637777 H0YIZ8 118 aa10.51□□□□□ -0.73
CACNA1A-249ENST00000637777 RPL29P47914 159 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-249ENST00000637777 FAM78BQ5VT40 261 aa10.51□□□□□ -0.73
CACNA1A-249ENST00000637777 SPATA31B1PQ5VZV4 182 aa10.51□□□□□ -0.73
CACNA1A-249ENST00000637777 TMEM37Q8WXS4 190 aa10.51□□□□□ -0.73
CACNA1A-249ENST00000637777 SMIM3Q9BZL3 60 aa10.51□□□□□ -0.73
CACNA1A-249ENST00000637777 PPP1R14DQ9NXH3 145 aa10.51□□□□□ -0.73
CACNA1A-249ENST00000637777 MBD2Q9UBB5 411 aa10.51□□□□□ -0.73
CACNA1A-249ENST00000637777 H3BTX0 84 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 GIG44P09565 113 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 PRR20EP86478 221 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 PRR20CP86479 221 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 PRR20DP86480 221 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 PRR20BP86481 221 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 PRR20AP86496 221 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 PSG9Q00887 426 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 LCN15Q6UWW0 184 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 NPCDR1Q9BY65 106 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 MFFQ9GZY8 342 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 KCNIP2Q9NS61 270 aa10.5□□□□□ -0.73
CACNA1A-249ENST00000637777 A0A087X0K7 114 aa10.49□□□□□ -0.73
CACNA1A-249ENST00000637777 IGHV4-28A0A0C4DH34 117 aa10.49□□□□□ -0.73
CACNA1A-249ENST00000637777 A0A0J9YX75 114 aa10.49□□□□□ -0.73
CACNA1A-249ENST00000637777 C17orf112F2Z3M2 114 aa10.49□□□□□ -0.73
CACNA1A-249ENST00000637777 DUSP14O95147 198 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-249ENST00000637777 IFNA5P01569 189 aa10.49□□□□□ -0.73
CACNA1A-249ENST00000637777 ZNF705DP0CH99 300 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-249ENST00000637777 ZNF705BP0CI00 300 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms