RNA–Protein interactions for RNA: ENST00000637692.1

CACNA1A-245, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-245ENST00000637692 ACTR3CQ9C0K3 210 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-245ENST00000637692 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-245ENST00000637692 RPRMQ9NS64 109 aa11.25□□□□□ -0.61
CACNA1A-245ENST00000637692 MLXQ9UH92 298 aa11.25□□□□□ -0.61
CACNA1A-245ENST00000637692 BOLA1Q9Y3E2 137 aa11.25□□□□□ -0.61
CACNA1A-245ENST00000637692 IGHV3-49A0A0A0MS15 119 aa11.24□□□□□ -0.61
CACNA1A-245ENST00000637692 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
CACNA1A-245ENST00000637692 FAM90A2PQ658T7 463 aa11.24□□□□□ -0.61
CACNA1A-245ENST00000637692 LCN12Q6JVE5 192 aa11.24□□□□□ -0.61
CACNA1A-245ENST00000637692 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
CACNA1A-245ENST00000637692 RPP25LQ8N5L8 163 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-245ENST00000637692 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
CACNA1A-245ENST00000637692 RFNGQ9Y644 331 aa11.24□□□□□ -0.61
CACNA1A-245ENST00000637692 TSPAN4O14817 238 aa11.23□□□□□ -0.61
CACNA1A-245ENST00000637692 CDC34P49427 236 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-245ENST00000637692 PAFAH1B2P68402 229 aa11.23□□□□□ -0.61
CACNA1A-245ENST00000637692 KHDC3LQ587J8 217 aa11.23□□□□□ -0.61
CACNA1A-245ENST00000637692 RBPMS2Q6ZRY4 209 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-245ENST00000637692 TCF24Q7RTU0 167 aa11.23□□□□□ -0.61
CACNA1A-245ENST00000637692 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-245ENST00000637692 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
CACNA1A-245ENST00000637692 IGHV3OR16-13A0A075B7E8 117 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 IGHV3-74A0A0B4J1X5 117 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 IGHV3-66A0A0C4DH42 116 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 CTXND1A0A1B0GTU2 59 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 IGLL1P15814 213 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 EDN2P20800 178 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 SULT1A2P50226 295 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 GUK1Q16774 197 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 CD300EQ496F6 205 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 FAM122CQ6P4D5 195 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 PQLC2Q6ZP29 291 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 MIR17HGQ75NE6 70 aa11.22□□□□□ -0.61
CACNA1A-245ENST00000637692 TRRAPQ9Y4A5 3859 aa11.21□□□□□ -0.61
CACNA1A-245ENST00000637692 A0A087X0K7 114 aa11.21□□□□□ -0.61
CACNA1A-245ENST00000637692 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
CACNA1A-245ENST00000637692 LEMD1Q68G75 181 aa11.21□□□□□ -0.61
CACNA1A-245ENST00000637692 TMEM61Q8N0U2 210 aa11.21□□□□□ -0.61
CACNA1A-245ENST00000637692 RAB24Q969Q5 203 aa11.21□□□□□ -0.61
CACNA1A-245ENST00000637692 FAM167A-AS1Q96KT0 104 aa11.21□□□□□ -0.61
CACNA1A-245ENST00000637692 NRN1Q9NPD7 142 aa11.21□□□□□ -0.61
CACNA1A-245ENST00000637692 MGAM2Q2M2H8 2515 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 OR4C46A6NHA9 309 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 MRPS12O15235 138 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 STAG3L2P0CL84 134 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 GP9P14770 177 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 ATF4P18848 351 aaPredicted RBP11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 RPL11P62913 178 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 LRRC20Q8TCA0 184 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 RNF141Q8WVD5 230 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 SLC25A2Q9BXI2 301 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 HRH4Q9H3N8 390 aa11.2□□□□□ -0.62
CACNA1A-245ENST00000637692 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 ZNF785A8K8V0 405 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 OR7C2O60412 319 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 ZNF253O75346 499 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 CXorf1O96002 111 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 IFNA7P01567 189 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 IGLC2P0DOY2 106 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 HIST1H1EP10412 219 aaKnown RBP11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 PDE6HQ13956 83 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 TEX261Q6UWH6 196 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 FAM213BQ8TBF2 198 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 MBD3L1Q8WWY6 194 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 OR51M1Q9H341 326 aa11.19□□□□□ -0.62
CACNA1A-245ENST00000637692 TRAV1-1A0A0B4J248 108 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 TEX46H3BTG2 121 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 CMC4P56277 68 aaPredicted RBP11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 EGFEM1PQ0D2K5 195 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 LCN15Q6UWW0 184 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 ALKAL2Q6UX46 152 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 SAT2Q96F10 170 aaPredicted RBP11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 MS4A6AQ9H2W1 248 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 TMEM167BQ9NRX6 74 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 CLEC5AQ9NY25 188 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 PLA2G2EQ9NZK7 142 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 SMAD5-AS1Q9Y6J3 95 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 NOTCH3Q9UM47 2321 aa11.18□□□□□ -0.62
CACNA1A-245ENST00000637692 MAP1LC3B2A6NCE7 125 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 DNASE2O00115 360 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 ISLRO14498 428 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 H2AFB1P0C5Y9 115 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 ARL14EPLP0DKL9 152 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 UBE2L3P68036 154 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 BEAN1Q3B7T3 259 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 ZNF680Q8NEM1 530 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 DCANP1Q8TF63 244 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 FXYD5Q96DB9 178 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 FAM110AQ9BQ89 295 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 SLC50A1Q9BRV3 221 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 MAP1LC3BQ9GZQ8 125 aa11.17□□□□□ -0.62
CACNA1A-245ENST00000637692 K7EQG2 157 aa11.16□□□□□ -0.62
CACNA1A-245ENST00000637692 HBE1P02100 147 aa11.16□□□□□ -0.62
CACNA1A-245ENST00000637692 NBEAP1P0C6P0 100 aa11.16□□□□□ -0.62
CACNA1A-245ENST00000637692 ID1P41134 155 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms