RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 HBE1P02100 147 aa14.34□□□□□ -0.11
CLN6-222ENST00000637667 IL5P05113 134 aa14.34□□□□□ -0.11
CLN6-222ENST00000637667 OR4E1P0C645 316 aa14.34□□□□□ -0.11
CLN6-222ENST00000637667 SMIM8Q96KF7 97 aa14.34□□□□□ -0.11
CLN6-222ENST00000637667 PMS2P5A8MQ11 134 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 H3BRN7 92 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 P0DMU3 169 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 FAM231AP0DMU4 169 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 FAM231CP0DMU5 169 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 ANXA7P20073 488 aaKnown RBP14.33□□□□□ -0.12
CLN6-222ENST00000637667 C4orf46Q504U0 113 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 FAM222AQ5U5X8 452 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 AMTNQ6UX39 209 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 SDHCQ99643 169 aaPredicted RBP14.33□□□□□ -0.12
CLN6-222ENST00000637667 SHANK2-AS3Q9BTD1 123 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 SLC25A39Q9BZJ4 359 aaPredicted RBP14.33□□□□□ -0.12
CLN6-222ENST00000637667 HIGD1AQ9Y241 93 aa14.33□□□□□ -0.12
CLN6-222ENST00000637667 HECTD4Q9Y4D8 3996 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 LOC102723971A0A1B0GUV8 181 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 HYPMO75409 117 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 CCNKO75909 580 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 BTCP35070 178 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 RAP2BP61225 183 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 POM121L12Q8N7R1 296 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 IGF2BP2-AS1Q96M15 143 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 NIPSNAP3BQ9BS92 247 aa14.32□□□□□ -0.12
CLN6-222ENST00000637667 TRAV8-2A0A0B4J237 113 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 CENPXA8MT69 81 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 DUSP14O95147 198 aaKnown RBP14.31□□□□□ -0.12
CLN6-222ENST00000637667 METTL15P1P0C7V9 234 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 LINC00869P0C866 280 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 RPL7P18124 248 aaKnown RBP14.31□□□□□ -0.12
CLN6-222ENST00000637667 CNN1P51911 297 aaKnown RBP14.31□□□□□ -0.12
CLN6-222ENST00000637667 PLP1P60201 277 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 RRAS2P62070 204 aaPredicted RBP14.31□□□□□ -0.12
CLN6-222ENST00000637667 SELENOTP62341 195 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 DLK1P80370 383 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 FGL1Q08830 312 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 RRN3P1Q2M238 152 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 IAH1Q2TAA2 248 aaPredicted RBP14.31□□□□□ -0.12
CLN6-222ENST00000637667 IGFL4Q6B9Z1 124 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 TMEM14EPQ6UXP3 125 aa14.31□□□□□ -0.12
CLN6-222ENST00000637667 YTHDF2Q9Y5A9 579 aaKnown RBP14.31□□□□□ -0.12
CLN6-222ENST00000637667 SCGB1D2O95969 90 aa14.3□□□□□ -0.12
CLN6-222ENST00000637667 OR5G3P0C626 314 aa14.3□□□□□ -0.12
CLN6-222ENST00000637667 RNF182Q8N6D2 247 aa14.3□□□□□ -0.12
CLN6-222ENST00000637667 FAM210BQ96KR6 192 aa14.3□□□□□ -0.12
CLN6-222ENST00000637667 TMEM208Q9BTX3 173 aa14.3□□□□□ -0.12
CLN6-222ENST00000637667 PLA2G2EQ9NZK7 142 aa14.3□□□□□ -0.12
CLN6-222ENST00000637667 FNDC10F2Z333 226 aa14.29□□□□□ -0.12
CLN6-222ENST00000637667 OXA1LQ15070 435 aa14.29□□□□□ -0.12
CLN6-222ENST00000637667 ZBTB8BQ8NAP8 495 aaPredicted RBP14.29□□□□□ -0.12
CLN6-222ENST00000637667 ZNF738Q8NE65 137 aa14.29□□□□□ -0.12
CLN6-222ENST00000637667 OR11H7Q8NGC8 314 aa14.29□□□□□ -0.12
CLN6-222ENST00000637667 OR10P1Q8NGE3 313 aa14.29□□□□□ -0.12
CLN6-222ENST00000637667 UHRF2Q96PU4 802 aa14.29□□□□□ -0.12
CLN6-222ENST00000637667 HERC2O95714 4834 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 K7EPK0 472 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 M0R2Z0 102 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 TSC22D2O75157 780 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 IL7P13232 177 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 TAS2R30P59541 319 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 SPINK13Q1W4C9 94 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 S100A7AQ86SG5 101 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 MITD1Q8WV92 249 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 NPVFQ9HCQ7 196 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 GSKIPQ9P0R6 139 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 MGAT4CQ9UBM8 478 aa14.28□□□□□ -0.12
CLN6-222ENST00000637667 RCL1Q9Y2P8 373 aaKnown RBP14.28□□□□□ -0.12
CLN6-222ENST00000637667 INSP01308 110 aa14.27□□□□□ -0.13
CLN6-222ENST00000637667 HTN3P15516 51 aa14.27□□□□□ -0.13
CLN6-222ENST00000637667 CNPY1Q3B7I2 92 aa14.27□□□□□ -0.13
CLN6-222ENST00000637667 LINC00336Q6ZUF6 198 aa14.27□□□□□ -0.13
CLN6-222ENST00000637667 ARL6Q9H0F7 186 aa14.27□□□□□ -0.13
CLN6-222ENST00000637667 A0A087X0K7 114 aa14.26□□□□□ -0.13
CLN6-222ENST00000637667 CRXO43186 299 aaPredicted RBP14.26□□□□□ -0.13
CLN6-222ENST00000637667 DAD1P61803 113 aa14.26□□□□□ -0.13
CLN6-222ENST00000637667 SLC38A11Q08AI6 406 aa14.26□□□□□ -0.13
CLN6-222ENST00000637667 TEPPQ6URK8 271 aa14.26□□□□□ -0.13
CLN6-222ENST00000637667 ZNF705GA8MUZ8 300 aaPredicted RBP14.25□□□□□ -0.13
CLN6-222ENST00000637667 CXCL3P19876 107 aa14.25□□□□□ -0.13
CLN6-222ENST00000637667 ARL16Q0P5N6 197 aa14.25□□□□□ -0.13
CLN6-222ENST00000637667 PATE2Q6UY27 113 aa14.25□□□□□ -0.13
CLN6-222ENST00000637667 BAP18Q8IXM2 172 aa14.25□□□□□ -0.13
CLN6-222ENST00000637667 ARV1Q9H2C2 271 aa14.25□□□□□ -0.13
CLN6-222ENST00000637667 BOLA2-SMG1P6H3BVE0 249 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 MBPP02686 304 aaPredicted RBP14.24□□□□□ -0.13
CLN6-222ENST00000637667 PRM2P04554 102 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 B2MP61769 119 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 HIST1H1AQ02539 215 aaPredicted RBP14.24□□□□□ -0.13
CLN6-222ENST00000637667 PSG3Q16557 428 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 PXDC1Q5TGL8 231 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 ZNF546Q86UE3 836 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 OR8A1Q8NGG7 326 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 LRRC20Q8TCA0 184 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 C20orf85Q9H1P6 137 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 RNF24Q9Y225 148 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 DNAH17Q9UFH2 4485 aa14.24□□□□□ -0.13
CLN6-222ENST00000637667 C7orf66A4D0T2 115 aa14.23□□□□□ -0.13
CLN6-222ENST00000637667 M0R2N4 97 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms