RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 GGACTQ9BVM4 153 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 SLC25A39Q9BZJ4 359 aaPredicted RBP10.03□□□□□ -0.8
PNKP-228ENST00000637325 RPRMQ9NS64 109 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 PTTG2Q9NZH5 202 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 HYDINQ4G0P3 5121 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 ZNF705EA8MWA4 302 aaPredicted RBP10.02□□□□□ -0.81
PNKP-228ENST00000637325 H3BRN7 92 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 DEDDO75618 318 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 UPK1BO75841 260 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 RPL7P18124 248 aaKnown RBP10.02□□□□□ -0.81
PNKP-228ENST00000637325 FXYD7P58549 80 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 PLP1P60201 277 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 ARL16Q0P5N6 197 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 Q8NAQ8 132 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 CSNK1G2-AS1Q8NCQ2 148 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 SHANK2-AS3Q9BTD1 123 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 ARL6Q9H0F7 186 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 GPN1Q9HCN4 374 aaPredicted RBP10.02□□□□□ -0.81
PNKP-228ENST00000637325 RNF24Q9Y225 148 aa10.02□□□□□ -0.81
PNKP-228ENST00000637325 LY6G6CO95867 125 aa10.01□□□□□ -0.81
PNKP-228ENST00000637325 RBMY1A1P0DJD3 496 aaKnown RBP10.01□□□□□ -0.81
PNKP-228ENST00000637325 RBMY1CP0DJD4 496 aa10.01□□□□□ -0.81
PNKP-228ENST00000637325 RBMY1FQ15415 496 aaKnown RBP10.01□□□□□ -0.81
PNKP-228ENST00000637325 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.01□□□□□ -0.81
PNKP-228ENST00000637325 ZNF546Q86UE3 836 aa10.01□□□□□ -0.81
PNKP-228ENST00000637325 X6R8D5 127 aa10.01□□□□□ -0.81
PNKP-228ENST00000637325 FAM24AA6NFZ4 105 aa10□□□□□ -0.81
PNKP-228ENST00000637325 F6UB75 175 aa10□□□□□ -0.81
PNKP-228ENST00000637325 AGPAT2O15120 278 aa10□□□□□ -0.81
PNKP-228ENST00000637325 CST7O76096 145 aa10□□□□□ -0.81
PNKP-228ENST00000637325 PSG9Q00887 426 aa10□□□□□ -0.81
PNKP-228ENST00000637325 RAB31Q13636 194 aa10□□□□□ -0.81
PNKP-228ENST00000637325 PXDC1Q5TGL8 231 aa10□□□□□ -0.81
PNKP-228ENST00000637325 FAM78BQ5VT40 261 aa10□□□□□ -0.81
PNKP-228ENST00000637325 LRRC20Q8TCA0 184 aa10□□□□□ -0.81
PNKP-228ENST00000637325 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
PNKP-228ENST00000637325 C20orf173Q96LM9 149 aa10□□□□□ -0.81
PNKP-228ENST00000637325 UHRF2Q96PU4 802 aa10□□□□□ -0.81
PNKP-228ENST00000637325 ARV1Q9H2C2 271 aa10□□□□□ -0.81
PNKP-228ENST00000637325 IGHV3OR16-12A0A075B7B8 117 aa9.99□□□□□ -0.81
PNKP-228ENST00000637325 A0A0J9YX75 114 aa9.99□□□□□ -0.81
PNKP-228ENST00000637325 RAB32Q13637 225 aa9.99□□□□□ -0.81
PNKP-228ENST00000637325 CLUHP3Q96NS8 147 aa9.99□□□□□ -0.81
PNKP-228ENST00000637325 HRH4Q9H3N8 390 aa9.99□□□□□ -0.81
PNKP-228ENST00000637325 ELOA3CA0A087WX78 387 aaPredicted RBP9.98□□□□□ -0.81
PNKP-228ENST00000637325 C11orf94C9JXX5 98 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 COX7A2P2O60397 106 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 CAMLGP49069 296 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 HBG1P69891 147 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 HBG2P69892 147 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 IGFL4Q6B9Z1 124 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 PATE2Q6UY27 113 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 Q6ZRG5 221 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 LINC00305Q7Z4B0 112 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 STX12Q86Y82 276 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 ZNF738Q8NE65 137 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 C2CD4CQ8TF44 421 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 C17orf77Q96MU5 243 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 MGST2Q99735 147 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 SLC35B3Q9H1N7 401 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 LYRM2Q9NU23 88 aaPredicted RBP9.98□□□□□ -0.81
PNKP-228ENST00000637325 UQCC1Q9NVA1 299 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 GOLT1BQ9Y3E0 138 aa9.98□□□□□ -0.81
PNKP-228ENST00000637325 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 INMT-MINDY4F8WBC2 141 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 PRAF2O60831 178 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 DUSP14O95147 198 aaKnown RBP9.97□□□□□ -0.81
PNKP-228ENST00000637325 RLN2P04090 185 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 HLA-DMBP28068 263 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 S100A11P31949 105 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 SULT1A1P50225 295 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 DEFA1P59665 94 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 DEFA3P59666 94 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 IFITM3Q01628 133 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 NRARPQ7Z6K4 114 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 RNF182Q8N6D2 247 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 C11orf1Q9H5F2 150 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 BATF3Q9NR55 127 aa9.97□□□□□ -0.81
PNKP-228ENST00000637325 A0A087X0K7 114 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 TRAV8-2A0A0B4J237 113 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 UBE2L5PA0A1B0GUS4 154 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 IGSF23A1L1A6 192 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 BAXQ07812 192 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 IL15RAQ13261 267 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 C10orf113Q5VZT2 155 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 ZNF705AQ6ZN79 300 aaPredicted RBP9.96□□□□□ -0.82
PNKP-228ENST00000637325 TMEM252Q8N6L7 170 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 ZNF709Q8N972 641 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 NEU1Q99519 415 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 DNAJC4Q9NNZ3 241 aa9.96□□□□□ -0.82
PNKP-228ENST00000637325 TRAV10A0A0B4J240 114 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 IGLL5B9A064 214 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 SIX6O95475 246 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 CNN1P51911 297 aaKnown RBP9.95□□□□□ -0.82
PNKP-228ENST00000637325 EMP1P54849 157 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 ATP6V1FQ16864 119 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 MIC13Q5XKP0 118 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 BPIFA4PQ86YQ2 179 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 OR1L4Q8NGR5 311 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms