RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 SLC25A39Q9BZJ4 359 aaPredicted RBP12.86□□□□□ -0.35
CLN6-218ENST00000637223 WFDC10AQ9H1F0 79 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 ARV1Q9H2C2 271 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 SLC39A9Q9NUM3 307 aa12.86□□□□□ -0.35
CLN6-218ENST00000637223 BORCS7-ASMTA0A0B4J1R7 106 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 ZNF98A6NK75 572 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 H3BRN7 92 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 TPT1P13693 172 aaKnown RBP12.85□□□□□ -0.35
CLN6-218ENST00000637223 PXDC1Q5TGL8 231 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 EIF5AL1Q6IS14 154 aaKnown RBP12.85□□□□□ -0.35
CLN6-218ENST00000637223 Q6ZRG5 221 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 SCGB1C1Q8TD33 95 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 SHANK2-AS3Q9BTD1 123 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 CYTL1Q9NRR1 136 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 UBQLN2Q9UHD9 624 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 SMAD5-AS1Q9Y6J3 95 aa12.85□□□□□ -0.35
CLN6-218ENST00000637223 S100A7P31151 101 aa12.84□□□□□ -0.35
CLN6-218ENST00000637223 C1orf194Q5T5A4 169 aa12.84□□□□□ -0.35
CLN6-218ENST00000637223 BAP18Q8IXM2 172 aa12.84□□□□□ -0.35
CLN6-218ENST00000637223 ZNF709Q8N972 641 aa12.84□□□□□ -0.35
CLN6-218ENST00000637223 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
CLN6-218ENST00000637223 TMEM37Q8WXS4 190 aa12.84□□□□□ -0.35
CLN6-218ENST00000637223 RSG1Q9BU20 258 aa12.84□□□□□ -0.35
CLN6-218ENST00000637223 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
CLN6-218ENST00000637223 PARD6GQ9BYG4 376 aaPredicted RBP12.84□□□□□ -0.35
CLN6-218ENST00000637223 SLC25A32Q9H2D1 315 aa12.84□□□□□ -0.35
CLN6-218ENST00000637223 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
CLN6-218ENST00000637223 C10orf113Q5VZT2 155 aa12.83□□□□□ -0.36
CLN6-218ENST00000637223 LINC00305Q7Z4B0 112 aa12.83□□□□□ -0.36
CLN6-218ENST00000637223 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
CLN6-218ENST00000637223 DEFB125Q8N687 156 aa12.83□□□□□ -0.36
CLN6-218ENST00000637223 C19orf73Q9NVV2 129 aa12.83□□□□□ -0.36
CLN6-218ENST00000637223 ELOA3CA0A087WX78 387 aaPredicted RBP12.82□□□□□ -0.36
CLN6-218ENST00000637223 C17orf112F2Z3M2 114 aa12.82□□□□□ -0.36
CLN6-218ENST00000637223 IGHV4-30-4P0DP06 118 aa12.82□□□□□ -0.36
CLN6-218ENST00000637223 ODF3L2Q3SX64 289 aa12.82□□□□□ -0.36
CLN6-218ENST00000637223 GCSAMLQ5JQS6 135 aa12.82□□□□□ -0.36
CLN6-218ENST00000637223 S100A7AQ86SG5 101 aa12.82□□□□□ -0.36
CLN6-218ENST00000637223 OR1L4Q8NGR5 311 aa12.82□□□□□ -0.36
CLN6-218ENST00000637223 DNAJC4Q9NNZ3 241 aa12.82□□□□□ -0.36
CLN6-218ENST00000637223 KCNIP2Q9NS61 270 aa12.82□□□□□ -0.36
CLN6-218ENST00000637223 TRAV2A0A0B4J234 112 aa12.81□□□□□ -0.36
CLN6-218ENST00000637223 K7EQG2 157 aa12.81□□□□□ -0.36
CLN6-218ENST00000637223 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
CLN6-218ENST00000637223 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
CLN6-218ENST00000637223 DCANP1Q8TF63 244 aa12.81□□□□□ -0.36
CLN6-218ENST00000637223 PFDN5Q99471 154 aa12.81□□□□□ -0.36
CLN6-218ENST00000637223 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
CLN6-218ENST00000637223 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
CLN6-218ENST00000637223 GALR1P47211 349 aa12.8□□□□□ -0.36
CLN6-218ENST00000637223 HSD17B11Q8NBQ5 300 aa12.8□□□□□ -0.36
CLN6-218ENST00000637223 TUBA4BQ9H853 241 aa12.8□□□□□ -0.36
CLN6-218ENST00000637223 SRD5A3Q9H8P0 318 aa12.8□□□□□ -0.36
CLN6-218ENST00000637223 MAP6D1Q9H9H5 199 aa12.8□□□□□ -0.36
CLN6-218ENST00000637223 SORL1Q92673 2214 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 TRAV5A0A0B4J249 113 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 FRMD6-AS1P0C7T7 363 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 SEC11BP0C7V7 166 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 ZNF688P0C7X2 276 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 RPL7P18124 248 aaKnown RBP12.79□□□□□ -0.36
CLN6-218ENST00000637223 ZNF124Q15973 351 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 FFAR4Q5NUL3 377 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 RPL7L1Q6DKI1 246 aaKnown RBP12.79□□□□□ -0.36
CLN6-218ENST00000637223 APRG1Q8IVJ8 170 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 GNPNAT1Q96EK6 184 aaPredicted RBP12.79□□□□□ -0.36
CLN6-218ENST00000637223 GPR82Q96P67 336 aa12.79□□□□□ -0.36
CLN6-218ENST00000637223 DEFB131AP59861 70 aa12.78□□□□□ -0.36
CLN6-218ENST00000637223 NDUFA5Q16718 116 aa12.78□□□□□ -0.36
CLN6-218ENST00000637223 C17orf77Q96MU5 243 aa12.78□□□□□ -0.36
CLN6-218ENST00000637223 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
CLN6-218ENST00000637223 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
CLN6-218ENST00000637223 CMC4P56277 68 aaPredicted RBP12.77□□□□□ -0.37
CLN6-218ENST00000637223 RAB14P61106 215 aa12.77□□□□□ -0.37
CLN6-218ENST00000637223 FAM78BQ5VT40 261 aa12.77□□□□□ -0.37
CLN6-218ENST00000637223 SPATA31B1PQ5VZV4 182 aa12.77□□□□□ -0.37
CLN6-218ENST00000637223 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.77□□□□□ -0.37
CLN6-218ENST00000637223 RNF24Q9Y225 148 aa12.77□□□□□ -0.37
CLN6-218ENST00000637223 TIMM9Q9Y5J7 89 aa12.77□□□□□ -0.37
CLN6-218ENST00000637223 A8MZ25 164 aa12.76□□□□□ -0.37
CLN6-218ENST00000637223 MRPS12O15235 138 aaKnown RBP12.76□□□□□ -0.37
CLN6-218ENST00000637223 SNRPCP09234 159 aaKnown RBP12.76□□□□□ -0.37
CLN6-218ENST00000637223 ATP6V0CP27449 155 aa12.76□□□□□ -0.37
CLN6-218ENST00000637223 RAB5CP51148 216 aa12.76□□□□□ -0.37
CLN6-218ENST00000637223 PSMG4Q5JS54 123 aa12.76□□□□□ -0.37
CLN6-218ENST00000637223 ASCL2Q99929 193 aa12.76□□□□□ -0.37
CLN6-218ENST00000637223 FAM110AQ9BQ89 295 aa12.76□□□□□ -0.37
CLN6-218ENST00000637223 SEPSECSQ9HD40 501 aaKnown RBP12.76□□□□□ -0.37
CLN6-218ENST00000637223 RBMY1BA6NDE4 496 aaKnown RBP12.75□□□□□ -0.37
CLN6-218ENST00000637223 RBMY1EA6NEQ0 496 aaKnown RBP12.75□□□□□ -0.37
CLN6-218ENST00000637223 SOCS3O14543 225 aa12.75□□□□□ -0.37
CLN6-218ENST00000637223 RBMY1DP0C7P1 496 aaKnown RBP12.75□□□□□ -0.37
CLN6-218ENST00000637223 SPP1P10451 314 aa12.75□□□□□ -0.37
CLN6-218ENST00000637223 SNRPD3P62318 126 aaKnown RBP12.75□□□□□ -0.37
CLN6-218ENST00000637223 CLLU1Q5K131 121 aa12.75□□□□□ -0.37
CLN6-218ENST00000637223 MIR17HGQ75NE6 70 aa12.75□□□□□ -0.37
CLN6-218ENST00000637223 BPIFA4PQ86YQ2 179 aa12.75□□□□□ -0.37
CLN6-218ENST00000637223 C16orf92Q96LL3 132 aa12.75□□□□□ -0.37
CLN6-218ENST00000637223 B9D2Q9BPU9 175 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms