RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 HIGD1AQ9Y241 93 aa13.33□□□□□ -0.28
CLN6-214ENST00000636314 X6R8D5 127 aa13.33□□□□□ -0.28
CLN6-214ENST00000636314 K7EPK0 472 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 HYPMO75409 117 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 OR5G3P0C626 314 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 BCAP31P51572 246 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 SLC38A11Q08AI6 406 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 ENKURQ8TC29 256 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 C2orf50Q96LR7 162 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 SHANK2-AS3Q9BTD1 123 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 RSG1Q9BU20 258 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 GGACTQ9BVM4 153 aa13.32□□□□□ -0.28
CLN6-214ENST00000636314 SLC25A39Q9BZJ4 359 aaPredicted RBP13.32□□□□□ -0.28
CLN6-214ENST00000636314 CAV2P51636 162 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 PLP1P60201 277 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 ARL16Q0P5N6 197 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 EBLN2Q6P2I7 272 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 S100A7AQ86SG5 101 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 ZNF546Q86UE3 836 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 OR4B1Q8NGF8 309 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 RPRMQ9NS64 109 aa13.31□□□□□ -0.28
CLN6-214ENST00000636314 UPK1BO75841 260 aa13.3□□□□□ -0.28
CLN6-214ENST00000636314 RBMY1A1P0DJD3 496 aaKnown RBP13.3□□□□□ -0.28
CLN6-214ENST00000636314 RBMY1CP0DJD4 496 aa13.3□□□□□ -0.28
CLN6-214ENST00000636314 PVALBP20472 110 aaPredicted RBP13.3□□□□□ -0.28
CLN6-214ENST00000636314 S100A10P60903 97 aa13.3□□□□□ -0.28
CLN6-214ENST00000636314 RBMY1FQ15415 496 aaKnown RBP13.3□□□□□ -0.28
CLN6-214ENST00000636314 LGALS9CQ6DKI2 356 aa13.3□□□□□ -0.28
CLN6-214ENST00000636314 UHRF2Q96PU4 802 aa13.3□□□□□ -0.28
CLN6-214ENST00000636314 ARL6Q9H0F7 186 aa13.3□□□□□ -0.28
CLN6-214ENST00000636314 HRH4Q9H3N8 390 aa13.3□□□□□ -0.28
CLN6-214ENST00000636314 F6UB75 175 aa13.29□□□□□ -0.28
CLN6-214ENST00000636314 GOSR2O14653 212 aa13.29□□□□□ -0.28
CLN6-214ENST00000636314 RPL7P18124 248 aaKnown RBP13.29□□□□□ -0.28
CLN6-214ENST00000636314 FXYD7P58549 80 aa13.29□□□□□ -0.28
CLN6-214ENST00000636314 FGL1Q08830 312 aa13.29□□□□□ -0.28
CLN6-214ENST00000636314 C20orf173Q96LM9 149 aa13.29□□□□□ -0.28
CLN6-214ENST00000636314 CLUHP3Q96NS8 147 aa13.29□□□□□ -0.28
CLN6-214ENST00000636314 DNAH6Q9C0G6 4158 aa13.28□□□□□ -0.28
CLN6-214ENST00000636314 A0A0J9YX75 114 aa13.28□□□□□ -0.28
CLN6-214ENST00000636314 AGPAT2O15120 278 aa13.28□□□□□ -0.28
CLN6-214ENST00000636314 PXDC1Q5TGL8 231 aa13.28□□□□□ -0.28
CLN6-214ENST00000636314 C17orf77Q96MU5 243 aa13.28□□□□□ -0.28
CLN6-214ENST00000636314 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
CLN6-214ENST00000636314 GPN1Q9HCN4 374 aaPredicted RBP13.28□□□□□ -0.28
CLN6-214ENST00000636314 RNF24Q9Y225 148 aa13.28□□□□□ -0.28
CLN6-214ENST00000636314 VPS13DQ5THJ4 4388 aa13.27□□□□□ -0.28
CLN6-214ENST00000636314 CST7O76096 145 aa13.27□□□□□ -0.29
CLN6-214ENST00000636314 PSG9Q00887 426 aa13.27□□□□□ -0.29
CLN6-214ENST00000636314 RAB32Q13637 225 aa13.27□□□□□ -0.29
CLN6-214ENST00000636314 FAM78BQ5VT40 261 aa13.27□□□□□ -0.29
CLN6-214ENST00000636314 ZNF709Q8N972 641 aa13.27□□□□□ -0.29
CLN6-214ENST00000636314 C11orf1Q9H5F2 150 aa13.27□□□□□ -0.29
CLN6-214ENST00000636314 ELOA3CA0A087WX78 387 aaPredicted RBP13.26□□□□□ -0.29
CLN6-214ENST00000636314 FAM24AA6NFZ4 105 aa13.26□□□□□ -0.29
CLN6-214ENST00000636314 ZNF705AQ6ZN79 300 aaPredicted RBP13.26□□□□□ -0.29
CLN6-214ENST00000636314 MGST2Q99735 147 aa13.26□□□□□ -0.29
CLN6-214ENST00000636314 SLC35B3Q9H1N7 401 aa13.26□□□□□ -0.29
CLN6-214ENST00000636314 LYRM2Q9NU23 88 aaPredicted RBP13.26□□□□□ -0.29
CLN6-214ENST00000636314 PCLOQ9Y6V0 5065 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 IGHV3OR16-12A0A075B7B8 117 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 C11orf94C9JXX5 98 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 COX7A2P2O60397 106 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 HLA-DMBP28068 263 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 RAB31Q13636 194 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 IGFL4Q6B9Z1 124 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 PATE2Q6UY27 113 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 STX12Q86Y82 276 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 C2CD4CQ8TF44 421 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 UQCC1Q9NVA1 299 aa13.25□□□□□ -0.29
CLN6-214ENST00000636314 A0A087X0K7 114 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 TRAV8-2A0A0B4J237 113 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 ZNF705FA8MVS1 300 aaPredicted RBP13.24□□□□□ -0.29
CLN6-214ENST00000636314 ZNF705DP0CH99 300 aaPredicted RBP13.24□□□□□ -0.29
CLN6-214ENST00000636314 ZNF705BP0CI00 300 aaPredicted RBP13.24□□□□□ -0.29
CLN6-214ENST00000636314 CAMLGP49069 296 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 SULT1A1P50225 295 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 HBG1P69891 147 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 HBG2P69892 147 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 IFITM3Q01628 133 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 IL15RAQ13261 267 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 LINC00305Q7Z4B0 112 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 ZNF738Q8NE65 137 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 NEU1Q99519 415 aa13.24□□□□□ -0.29
CLN6-214ENST00000636314 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 IGSF23A1L1A6 192 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 PRAF2O60831 178 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 DUSP14O95147 198 aaKnown RBP13.23□□□□□ -0.29
CLN6-214ENST00000636314 Q6ZTC4 211 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 NRARPQ7Z6K4 114 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 TMEM252Q8N6L7 170 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 LRRC20Q8TCA0 184 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 CELA1Q9UNI1 258 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 GOLT1BQ9Y3E0 138 aa13.23□□□□□ -0.29
CLN6-214ENST00000636314 SMIM9A6NGZ8 99 aa13.22□□□□□ -0.29
CLN6-214ENST00000636314 A8MTW9 85 aa13.22□□□□□ -0.29
CLN6-214ENST00000636314 INMT-MINDY4F8WBC2 141 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms