RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	TMEM128	Q5BJH2	165 aa		5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C1orf194	Q5T5A4	169 aa		5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022	OR8G2P	Q6IF36	304 aa		5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022	EIF4E3	Q8N5X7	224 aa	Known RBP	5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022	OR1S1	Q8NH92	325 aa		5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SAV1	Q9H4B6	383 aa	Predicted RBP	5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022	CELA1	Q9UNI1	258 aa		5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022		V9GYH0	126 aa		5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022	HLA-DRB4	X5D2U9	266 aa		5.27	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TRAV10	A0A0B4J240	114 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	PIGBOS1	A0A0B4J2F0	54 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ZFP92	A6NM28	416 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	PRSS46	E5RG02	174 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SOCS3	O14543	225 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	FAU	P35544	74 aa	Known RBP	5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	NUP62	P37198	522 aa	Predicted RBP	5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TAS2R60	P59551	318 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	DEFB1	P60022	68 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	NUTF2	P61970	127 aa	Known RBP	5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	BTN1A1	Q13410	526 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ZNF79	Q15937	498 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C12orf74	Q32Q52	190 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	PYDC2	Q56P42	97 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	GDF5OS	Q5U4N7	250 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ZNF705A	Q6ZN79	300 aa	Predicted RBP	5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TMED4	Q7Z7H5	227 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TOMM5	Q8N4H5	51 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	THAP8	Q8NA92	274 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SLC35E1	Q96K37	410 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C17orf77	Q96MU5	243 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	CLUHP3	Q96NS8	147 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TRGV9	Q99603	122 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	PBDC1	Q9BVG4	233 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C1QTNF4	Q9BXJ3	329 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	XCL2	Q9UBD3	114 aa		5.26	□□□□□ -1.57
CACNA1A-222	ENST00000636022	IGHV4-4	A0A075B6R2	117 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ZNF705F	A8MVS1	300 aa	Predicted RBP	5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SNRPGP15	A8MWD9	76 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022		L7N2F9	121 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SFT2D2	O95562	160 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ZNF705D	P0CH99	300 aa	Predicted RBP	5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ZNF705B	P0CI00	300 aa	Predicted RBP	5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	IAPP	P10997	89 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	RAB4A	P20338	218 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	RPL35	P42766	123 aa	Known RBP	5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	PSMB3	P49720	205 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	AP3S2	P59780	193 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	PPP1R1A	Q13522	171 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	OR2F1	Q13607	317 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	MAJIN	Q3KP22	176 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SAPCD1	Q5SSQ6	148 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	GSG1L	Q6UXU4	331 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	CCDC190	Q86UF4	302 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ZNF709	Q8N972	641 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	MAGT1	Q9H0U3	335 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	BIN3	Q9NQY0	253 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TMED3	Q9Y3Q3	217 aa		5.25	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C9orf170	A2RU37	121 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ISLR	O14498	428 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SYNGR2	O43760	224 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	MED6	O75586	246 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	AMBP	P02760	352 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	PAX9	P55771	341 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	LYZ	P61626	148 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	RAB11A	P62491	216 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TNP2	Q05952	138 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TMEM182	Q6ZP80	229 aa	Predicted RBP	5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	FOXI2	Q6ZQN5	318 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	COMMD7	Q86VX2	200 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	OR8I2	Q8N0Y5	310 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C20orf173	Q96LM9	149 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	LINC00052	Q96N35	136 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	CIB3	Q96Q77	187 aa	Predicted RBP	5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	RNF126	Q9BV68	326 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SCRT1	Q9BWW7	348 aa		5.24	□□□□□ -1.57
CACNA1A-222	ENST00000636022	DEFB131B	A0A096LNP1	70 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022		A0A0J9YX75	114 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SMIM9	A6NGZ8	99 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022		A8MTW9	85 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	KRBOX1	C9JBD0	128 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022		F6UB75	175 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	CFD	P00746	253 aa	Predicted RBP	5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	IGKV3-20	P01619	116 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	S100A8	P05109	93 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	S100A9	P06702	114 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	HOXB5	P09067	269 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ID1	P41134	155 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	FXYD7	P58549	80 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	UBE2M	P61081	183 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ID3	Q02535	119 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	BAK1	Q16611	211 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SAMD13	Q5VXD3	122 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SPATA31B1P	Q5VZV4	182 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	GGNBP1	Q5YKI7	109 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TEX261	Q6UWH6	196 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C9orf62	Q8N4C0	152 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SDHC	Q99643	169 aa	Predicted RBP	5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C2orf88	Q9BSF0	95 aa		5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms