RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 EXOC3-AS1Q8N2X6 119 aa11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 OR4X2Q8NGF9 303 aa11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 SCNM1Q9BWG6 230 aa11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 RABAC1Q9UI14 185 aa11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 F11RQ9Y624 299 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 NKX2-8O15522 239 aa11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 NDUFB3O43676 98 aa11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 ENSAO43768 121 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 NCR2O95944 276 aa11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 APOBEC3AP31941 199 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 NUP37Q8NFH4 326 aa11.78□□□□□ -0.52
CACNA1A-220ENST00000635988 A1L4Q6 167 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 K7EP34 96 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 SNAI2O43623 268 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 CCL8P80075 99 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 PPIAL4EA0A075B759 164 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 PPIAL4FP0DN26 164 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 CD40P25942 277 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 RBPJQ06330 500 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 OR8A1Q8NGG7 326 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 NGBQ9NPG2 151 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 PSG8Q9UQ74 426 aa11.77□□□□□ -0.53
CACNA1A-220ENST00000635988 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 ZNF785A8K8V0 405 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 CDX4O14627 284 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 S100A7P31151 101 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 PSMG4Q5JS54 123 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 ASCL5Q7RTU5 278 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 RASL11BQ9BPW5 248 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 U3KQK5 164 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 CT45A10P0DMU9 189 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 UQCRFS1P47985 274 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 PSG3Q16557 428 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 OR5A1Q8NGJ0 315 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 RITA1Q96K30 269 aa11.76□□□□□ -0.53
CACNA1A-220ENST00000635988 CELSR3Q9NYQ7 3312 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 A0A096LNJ9 63 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 IGHV3-21A0A0B4J1V1 117 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 C17orf100A8MU93 164 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 G3V4G9 280 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 CRYGBP07316 175 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 CEACAM3P40198 252 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 GUCD1Q96NT3 240 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 A0A0G2JLM5 398 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 H3BUT2 72 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 KIR3DS1Q14943 382 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 ORMDL3Q8N138 153 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 PRELID3AQ96N28 172 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 SHANK2-AS3Q9BTD1 123 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 SIGLEC9Q9Y336 463 aa11.75□□□□□ -0.53
CACNA1A-220ENST00000635988 NAV3Q8IVL0 2385 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 CADP27708 2225 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 K7EM74 188 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 SAP30O75446 220 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 HBDP02042 147 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 FOXE3Q13461 319 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 SH3BGRL2Q9UJC5 107 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 VPS13AQ96RL7 3174 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 D6R8Y8 96 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 TMEM178BH3BS89 294 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 PLA2G2CQ5R387 149 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 FAM104BQ5XKR9 115 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 PRO3102Q9H379 93 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 JKAMPQ9P055 326 aa11.74□□□□□ -0.53
CACNA1A-220ENST00000635988 FCN3O75636 299 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 DLX6P56179 175 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 ZNF414Q96IQ9 312 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 TPPP3Q9BW30 176 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 THYN1Q9P016 225 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 IGHV3-72A0A0B4J1Y9 119 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 SERTM2A0A1B0GWG4 89 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 RBP4P02753 201 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 CACNG7P62955 275 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 TMEM155Q4W5P6 130 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 TMEM108Q6UXF1 575 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 ADAMTSL5Q6ZMM2 481 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 NEGR1Q7Z3B1 354 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 S100A7AQ86SG5 101 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 PPP1R27Q86WC6 154 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 JMJD8Q96S16 334 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 NPFFR1Q9GZQ6 430 aa11.73□□□□□ -0.53
CACNA1A-220ENST00000635988 LOC389332A0A1B0GUA5 103 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 H3BRN7 92 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 I3L2K1 104 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 FAM106CPP0CH98 169 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 IGHV1-8P0DP01 117 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 CRIP1P50238 77 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 FAM106AQ4KMX7 169 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 C1orf185Q5T7R7 199 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 SRSF8Q9BRL6 282 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 FAM215AQ9Y5M1 114 aa11.72□□□□□ -0.53
CACNA1A-220ENST00000635988 TEX22C9J3V5 150 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms