RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 PMS2P11Q13670 270 aa11.43□□□□□ -0.58
LINC00339-209ENST00000635450 SAMD13Q5VXD3 122 aa11.43□□□□□ -0.58
LINC00339-209ENST00000635450 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
LINC00339-209ENST00000635450 PPP1R1CQ8WVI7 109 aa11.43□□□□□ -0.58
LINC00339-209ENST00000635450 MGST2Q99735 147 aa11.43□□□□□ -0.58
LINC00339-209ENST00000635450 SLC25A32Q9H2D1 315 aa11.43□□□□□ -0.58
LINC00339-209ENST00000635450 ALG5Q9Y673 324 aa11.43□□□□□ -0.58
LINC00339-209ENST00000635450 UBE2L5PA0A1B0GUS4 154 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 KNCNA6PVL3 124 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 PSMB3P49720 205 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 Q6ZRG5 221 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 LINC00052Q96N35 136 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 SCRT1Q9BWW7 348 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 ARV1Q9H2C2 271 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 OR5AC2Q9NZP5 309 aa11.42□□□□□ -0.58
LINC00339-209ENST00000635450 COX7A2P2O60397 106 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 CA1P00915 261 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-209ENST00000635450 RPL7P18124 248 aaKnown RBP11.41□□□□□ -0.58
LINC00339-209ENST00000635450 ATF4P18848 351 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-209ENST00000635450 VWC2Q2TAL6 325 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 MORN3Q6PF18 240 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-209ENST00000635450 TRPT1Q86TN4 253 aaKnown RBP11.41□□□□□ -0.58
LINC00339-209ENST00000635450 RNF183Q96D59 192 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 C16orf92Q96LL3 132 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 UHRF2Q96PU4 802 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 SHANK2-AS3Q9BTD1 123 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 RSG1Q9BU20 258 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 WDR83OSQ9Y284 106 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 BIRC6Q9NR09 4857 aa11.41□□□□□ -0.58
LINC00339-209ENST00000635450 ISLRO14498 428 aa11.4□□□□□ -0.58
LINC00339-209ENST00000635450 MPC2O95563 127 aa11.4□□□□□ -0.58
LINC00339-209ENST00000635450 SPP1P10451 314 aa11.4□□□□□ -0.58
LINC00339-209ENST00000635450 FGF7P21781 194 aa11.4□□□□□ -0.58
LINC00339-209ENST00000635450 NHLH2Q02577 135 aa11.4□□□□□ -0.58
LINC00339-209ENST00000635450 OR5C1Q8NGR4 320 aa11.4□□□□□ -0.58
LINC00339-209ENST00000635450 GATAD1Q8WUU5 269 aa11.4□□□□□ -0.58
LINC00339-209ENST00000635450 ELOA3CA0A087WX78 387 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-209ENST00000635450 H0YIZ8 118 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 MPDU1O75352 247 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 JTBO76095 146 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 FGL1Q08830 312 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 TMEM41BQ5BJD5 291 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 PATE2Q6UY27 113 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 LINC00305Q7Z4B0 112 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 OR1L4Q8NGR5 311 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 MED28Q9H204 178 aa11.39□□□□□ -0.59
LINC00339-209ENST00000635450 CXorf65A6NEN9 183 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 SOCS3O14543 225 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 RPL29P47914 159 aaKnown RBP11.38□□□□□ -0.59
LINC00339-209ENST00000635450 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
LINC00339-209ENST00000635450 OPCMLQ14982 345 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 RGS21Q2M5E4 152 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 C10orf113Q5VZT2 155 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 PFDN5Q99471 154 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 DNAJC4Q9NNZ3 241 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 RPRMQ9NS64 109 aa11.38□□□□□ -0.59
LINC00339-209ENST00000635450 HLA-DRB4P13762 266 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 B2MP61769 119 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 CLINT1Q14677 625 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 FOXI2Q6ZQN5 318 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 LRRC20Q8TCA0 184 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 RARRES2Q99969 163 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 RNF126Q9BV68 326 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 SLC39A9Q9NUM3 307 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 HLA-DRB4X5D2U9 266 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 KMT2AQ03164 3969 aa11.37□□□□□ -0.59
LINC00339-209ENST00000635450 H3BMM0 161 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 CXCL3P19876 107 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 PRR20EP86478 221 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 PRR20CP86479 221 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 PRR20DP86480 221 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 PRR20BP86481 221 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 PRR20AP86496 221 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 SPATA31B1PQ5VZV4 182 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 BPIFA4PQ86YQ2 179 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 THAP6Q8TBB0 222 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 CHAC2Q8WUX2 184 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 TMEM37Q8WXS4 190 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 LINC00476Q8WZB0 136 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 SAV1Q9H4B6 383 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-209ENST00000635450 MBD2Q9UBB5 411 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 PXMP4Q9Y6I8 212 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 FRAS1Q86XX4 4008 aa11.36□□□□□ -0.59
LINC00339-209ENST00000635450 A0A087X0K7 114 aa11.35□□□□□ -0.59
LINC00339-209ENST00000635450 RPL12P30050 165 aaKnown RBP11.35□□□□□ -0.59
LINC00339-209ENST00000635450 FCN2Q15485 313 aa11.35□□□□□ -0.59
LINC00339-209ENST00000635450 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
LINC00339-209ENST00000635450 OR11H2Q8NH07 326 aa11.35□□□□□ -0.59
LINC00339-209ENST00000635450 NPCDR1Q9BY65 106 aa11.35□□□□□ -0.59
LINC00339-209ENST00000635450 HSPB11Q9Y547 144 aa11.35□□□□□ -0.59
LINC00339-209ENST00000635450 OR4B1Q8NGF8 309 aa11.34□□□□□ -0.59
LINC00339-209ENST00000635450 C17orf77Q96MU5 243 aa11.34□□□□□ -0.59
LINC00339-209ENST00000635450 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
LINC00339-209ENST00000635450 C17orf112F2Z3M2 114 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 IFNA5P01569 189 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms