RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CD24P25063 80 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 RTTNQ86VV8 2226 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
COL11A1-211ENST00000635193 A0A1W2PPM0 123 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
COL11A1-211ENST00000635193 ZCCHC24Q8N2G6 241 aaKnown RBP9.55□□□□□ -0.88
COL11A1-211ENST00000635193 CD177Q8N6Q3 437 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 NEU4Q8WWR8 484 aaPredicted RBP9.55□□□□□ -0.88
COL11A1-211ENST00000635193 SDK2Q58EX2 2172 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 METRNQ9UJH8 293 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 DOCK6Q96HP0 2047 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 IGHV1-46P01743 117 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 COX8AP10176 69 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 LTBRP36941 435 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 ATP5J2P56134 94 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 BVES-AS1Q5T3Y7 98 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 TRBV20-1A0A075B6N2 111 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 H3BMM0 161 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 IGHV3-11P01762 117 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 UBE2WQ96B02 151 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 TRGV9Q99603 122 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 GFRA4Q9GZZ7 299 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 ESPL1Q14674 2120 aa9.55□□□□□ -0.88
COL11A1-211ENST00000635193 MYOD1P15172 320 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 C20orf204Q6ZNR8 217 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 AMN1Q8IY45 258 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 ANAPC10Q9UM13 185 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 ZNF318Q5VUA4 2279 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 GAGE2AQ6NT46 116 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 GATD1Q8NB37 220 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 SBF1O95248 1867 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 TIMM23O14925 209 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 LINC00205P59089 165 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 SH2D1AO60880 128 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 TRAV40A0A0B4J280 105 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 E9PLN8 166 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 SMKR1H3BMG3 65 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 TOMM40O96008 361 aa9.54□□□□□ -0.88
COL11A1-211ENST00000635193 CEACAM8P31997 349 aaPredicted RBP9.54□□□□□ -0.88
COL11A1-211ENST00000635193 CRPP02741 224 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 ZFP36L1Q07352 338 aaKnown RBP9.53□□□□□ -0.88
COL11A1-211ENST00000635193 FOXL2NBQ6ZUU3 175 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 MBNL3Q9NUK0 354 aaKnown RBP9.53□□□□□ -0.88
COL11A1-211ENST00000635193 ARTNQ5T4W7 220 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 ABHD17AQ96GS6 310 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 CITED2Q99967 270 aaPredicted RBP9.53□□□□□ -0.88
COL11A1-211ENST00000635193 LIME1Q9H400 295 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 ZNF329Q86UD4 541 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 TMEM167AQ8TBQ9 72 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 KIR2DL5BA0A0G2JN68 375 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 KIR2DL5BA0A0G2JPC4 375 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 KIR2DL5AQ8N109 375 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
COL11A1-211ENST00000635193 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
COL11A1-211ENST00000635193 TMEM8BA6NDV4 472 aa9.52□□□□□ -0.88
COL11A1-211ENST00000635193 IL18BPO95998 194 aa9.52□□□□□ -0.88
COL11A1-211ENST00000635193 CCL25O15444 150 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 PLAURQ03405 335 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 C17orf82Q86X59 251 aaPredicted RBP9.52□□□□□ -0.89
COL11A1-211ENST00000635193 ITLN2Q8WWU7 325 aaPredicted RBP9.52□□□□□ -0.89
COL11A1-211ENST00000635193 LINC01587Q99440 93 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 ARHGEF17Q96PE2 2063 aaPredicted RBP9.52□□□□□ -0.89
COL11A1-211ENST00000635193 LINC00158P58513 81 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 IGKV1-6A0A0C4DH72 117 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 GAGE12JA6NER3 117 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 GAGE7O76087 117 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 GAGE12FP0CL80 117 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 GAGE12GP0CL81 117 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 GAGE12IP0CL82 117 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 GAGE4Q13068 117 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 LINC00479Q96M42 142 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 OVOL2Q9BRP0 275 aa9.52□□□□□ -0.89
COL11A1-211ENST00000635193 PRSS57Q6UWY2 283 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 ABCA7Q8IZY2 2146 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 FNDC10F2Z333 226 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 PAX9P55771 341 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 Q86TA4 180 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 SPANXDQ9BXN6 97 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 RPL15P61313 204 aaKnown RBP9.51□□□□□ -0.89
COL11A1-211ENST00000635193 TMEM200BQ69YZ2 307 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 C1orf147Q96MC9 270 aaPredicted RBP9.51□□□□□ -0.89
COL11A1-211ENST00000635193 CCL19Q99731 98 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 DPH3P1Q9H4G8 78 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 SS18L2Q9UHA2 77 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 H0YJW9 148 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 ZNF726P1Q15940 193 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
COL11A1-211ENST00000635193 IGLC7A0M8Q6 106 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 LYNX1G3V0Z9 82 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 LYNX1P0DP58 116 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 OVOL1O14753 267 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 SIGLEC15Q6ZMC9 328 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 Q6ZVH6 145 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
COL11A1-211ENST00000635193 CSRP2Q16527 193 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 CYYR1Q96J86 154 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 H3BMG7 143 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms