RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 CXorf65A6NEN9 183 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 F6UB75 175 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 IGKV3-20P01619 116 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 MEOX2P50222 304 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 SULT1A1P50225 295 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 TMEM41BQ5BJD5 291 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 ZNF546Q86UE3 836 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 CSNK1G2-AS1Q8NCQ2 148 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 GPR82Q96P67 336 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 ARV1Q9H2C2 271 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 SAV1Q9H4B6 383 aaPredicted RBP10.33□□□□□ -0.76
PNKP-223ENST00000629179 XCL2Q9UBD3 114 aa10.33□□□□□ -0.76
PNKP-223ENST00000629179 ATF4P18848 351 aaPredicted RBP10.32□□□□□ -0.76
PNKP-223ENST00000629179 FXYD7P58549 80 aa10.32□□□□□ -0.76
PNKP-223ENST00000629179 FGL1Q08830 312 aa10.32□□□□□ -0.76
PNKP-223ENST00000629179 IGFL4Q6B9Z1 124 aa10.32□□□□□ -0.76
PNKP-223ENST00000629179 FOXI2Q6ZQN5 318 aa10.32□□□□□ -0.76
PNKP-223ENST00000629179 UQCC1Q9NVA1 299 aa10.32□□□□□ -0.76
PNKP-223ENST00000629179 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
PNKP-223ENST00000629179 RPL7P18124 248 aaKnown RBP10.31□□□□□ -0.76
PNKP-223ENST00000629179 S100A11P31949 105 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 CAMLGP49069 296 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 NUTF2P61970 127 aaKnown RBP10.31□□□□□ -0.76
PNKP-223ENST00000629179 LRRC37A5PQ49AS3 106 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 PXDC1Q5TGL8 231 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 SAMD13Q5VXD3 122 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 MIC13Q5XKP0 118 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 STX12Q86Y82 276 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 OR4B1Q8NGF8 309 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 NMES1Q9C002 83 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 C11orf68Q9H3H3 251 aaKnown RBP10.31□□□□□ -0.76
PNKP-223ENST00000629179 RPRMQ9NS64 109 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 WDR83OSQ9Y284 106 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 X6R8D5 127 aa10.31□□□□□ -0.76
PNKP-223ENST00000629179 TRAV8-2A0A0B4J237 113 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 A0A0J9YX75 114 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 UBE2L5PA0A1B0GUS4 154 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 ZNF705EA8MWA4 302 aaPredicted RBP10.3□□□□□ -0.76
PNKP-223ENST00000629179 H0YIZ8 118 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 SSNA1O43805 119 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 RLN2P04090 185 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 RBMY1A1P0DJD3 496 aaKnown RBP10.3□□□□□ -0.76
PNKP-223ENST00000629179 RBMY1CP0DJD4 496 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 H2BFSP57053 126 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 HBG1P69891 147 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 HBG2P69892 147 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 NHLH2Q02577 135 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 RAB31Q13636 194 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 RBMY1FQ15415 496 aaKnown RBP10.3□□□□□ -0.76
PNKP-223ENST00000629179 VWC2Q2TAL6 325 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 FAM78BQ5VT40 261 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 S100A7AQ86SG5 101 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 RNF182Q8N6D2 247 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 Q8NAQ8 132 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 TMEM37Q8WXS4 190 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 C1QTNF4Q9BXJ3 329 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 OR5AC2Q9NZP5 309 aa10.3□□□□□ -0.76
PNKP-223ENST00000629179 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
PNKP-223ENST00000629179 COX7A2P2O60397 106 aa10.29□□□□□ -0.76
PNKP-223ENST00000629179 NANOS2P60321 138 aaKnown RBP10.29□□□□□ -0.76
PNKP-223ENST00000629179 CYCSP99999 105 aaKnown RBP10.29□□□□□ -0.76
PNKP-223ENST00000629179 BAXQ07812 192 aa10.29□□□□□ -0.76
PNKP-223ENST00000629179 MORN5Q5VZ52 161 aa10.29□□□□□ -0.76
PNKP-223ENST00000629179 CEMP1Q6PRD7 247 aaPredicted RBP10.29□□□□□ -0.76
PNKP-223ENST00000629179 C11orf45Q8TAV5 145 aa10.29□□□□□ -0.76
PNKP-223ENST00000629179 SLC35B3Q9H1N7 401 aa10.29□□□□□ -0.76
PNKP-223ENST00000629179 A0A087X0K7 114 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 NUPR2A6NF83 97 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 E5RGE8 158 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 SNRPCP09234 159 aaKnown RBP10.28□□□□□ -0.76
PNKP-223ENST00000629179 MIFP14174 115 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 FGF7P21781 194 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 HLA-DMBP28068 263 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 PRR20EP86478 221 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 PRR20CP86479 221 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 PRR20DP86480 221 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 PRR20BP86481 221 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 PRR20AP86496 221 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 PSG9Q00887 426 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 ATP6V1FQ16864 119 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 C10orf113Q5VZT2 155 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 SPATA31B1PQ5VZV4 182 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 Q6ZRG5 221 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 ZNF709Q8N972 641 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 DNAJC4Q9NNZ3 241 aa10.28□□□□□ -0.76
PNKP-223ENST00000629179 ELOA3CA0A087WX78 387 aaPredicted RBP10.27□□□□□ -0.77
PNKP-223ENST00000629179 ZNF705DP0CH99 300 aaPredicted RBP10.27□□□□□ -0.77
PNKP-223ENST00000629179 ZNF705BP0CI00 300 aaPredicted RBP10.27□□□□□ -0.77
PNKP-223ENST00000629179 PRB4P10163 310 aaPredicted RBP10.27□□□□□ -0.77
PNKP-223ENST00000629179 RPL29P47914 159 aaKnown RBP10.27□□□□□ -0.77
PNKP-223ENST00000629179 OPCMLQ14982 345 aa10.27□□□□□ -0.77
PNKP-223ENST00000629179 LRRC20Q8TCA0 184 aa10.27□□□□□ -0.77
PNKP-223ENST00000629179 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
PNKP-223ENST00000629179 PPP1R1CQ8WVI7 109 aa10.27□□□□□ -0.77
PNKP-223ENST00000629179 RNF126Q9BV68 326 aa10.27□□□□□ -0.77
PNKP-223ENST00000629179 SLC25A31Q9H0C2 315 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms