RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 KIR2DL5BA0A0G2JPC4 375 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 COX7A2P2O60397 106 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 GIPP09681 153 aaPredicted RBP9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 S100A7P31151 101 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 B2MP61769 119 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 Q5BKY6 102 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 MORN5Q5VZ52 161 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 LINC00305Q7Z4B0 112 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 KIR2DL5AQ8N109 375 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 KIR2DL5BQ8NHK3 375 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 GPR82Q96P67 336 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 ATP5SQ99766 215 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 RSG1Q9BU20 258 aa9.99□□□□□ -0.81
SOX2-OT-246ENST00000628343 ELOA3CA0A087WX78 387 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 MPDU1O75352 247 aa9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 RPL7P18124 248 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 PSMB3P49720 205 aa9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 C10orf113Q5VZT2 155 aa9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 TRPT1Q86TN4 253 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 STHQ8IWL8 128 aa9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 WWC2-AS2Q96NR7 200 aa9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 OVOL2Q9BRP0 275 aa9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 WDR61Q9GZS3 305 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 SLC39A9Q9NUM3 307 aa9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 PXMP4Q9Y6I8 212 aa9.98□□□□□ -0.81
SOX2-OT-246ENST00000628343 UBE2CO00762 179 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 MRPS12O15235 138 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 MEOX2P50222 304 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 DEFB1P60022 68 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 DEFB135Q30KP9 77 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 ACTL10Q5JWF8 245 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 Q6ZRG5 221 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 Q6ZWC4 215 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 S100A7AQ86SG5 101 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 ASB13Q8WXK3 278 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 SMIM3Q9BZL3 60 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 CSTL1Q9H114 145 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 DNAJC4Q9NNZ3 241 aa9.97□□□□□ -0.81
SOX2-OT-246ENST00000628343 ISLRO14498 428 aa9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 ATF4P18848 351 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 ID1P41134 155 aa9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 GCSAMLQ5JQS6 135 aa9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 OR1L4Q8NGR5 311 aa9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 C16orf92Q96LL3 132 aa9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 C20orf173Q96LM9 149 aa9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 LINC00052Q96N35 136 aa9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 WFDC1Q9HC57 220 aa9.96□□□□□ -0.82
SOX2-OT-246ENST00000628343 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 A0A087X0K7 114 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 TRAV8-2A0A0B4J237 113 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 TRAV5A0A0B4J249 113 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 CA1P00915 261 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 GIG44P09565 113 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 FGL1Q08830 312 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 GDF5OSQ5U4N7 250 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 SAMD13Q5VXD3 122 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 PFDN5Q99471 154 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 EDA2RQ9HAV5 297 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 TP53TG1Q9Y2A0 90 aa9.95□□□□□ -0.82
SOX2-OT-246ENST00000628343 G3V3Q6 166 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 H3BMM0 161 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 SPRY2O43597 315 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 SNRPCP09234 159 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 HLA-DRB4P13762 266 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 C4BPBP20851 252 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 IGFL4Q6B9Z1 124 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 BPIFA4PQ86YQ2 179 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 OR2T35Q8NGX2 323 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 GATAD1Q8WUU5 269 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 RNF183Q96D59 192 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 AQP10Q96PS8 301 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 RNF24Q9Y225 148 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 HLA-DRB4X5D2U9 266 aa9.94□□□□□ -0.82
SOX2-OT-246ENST00000628343 F6UB75 175 aa9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 IFNA5P01569 189 aa9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 IGLC2P0DOY2 106 aa9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 FOXI2Q6ZQN5 318 aa9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 RNF182Q8N6D2 247 aa9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 ZNF709Q8N972 641 aa9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 PARD6GQ9BYG4 376 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 SAV1Q9H4B6 383 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 KCNIP2Q9NS61 270 aa9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 RFNGQ9Y644 331 aa9.93□□□□□ -0.82
SOX2-OT-246ENST00000628343 FXYD6-FXYD2A0A087WZ82 144 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 A0A0J9YX75 114 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 RNF222A6NCQ9 220 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 C17orf112F2Z3M2 114 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 H3BQ15 152 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 H3BTX0 84 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 SPP1P10451 314 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 MORN3Q6PF18 240 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 SCGB1C1Q8TD33 95 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 RPRMQ9NS64 109 aa9.92□□□□□ -0.82
SOX2-OT-246ENST00000628343 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
SOX2-OT-246ENST00000628343 NBEAL2Q6ZNJ1 2754 aa9.91□□□□□ -0.82
SOX2-OT-246ENST00000628343 SLC17A3O00476 420 aa9.91□□□□□ -0.82
SOX2-OT-246ENST00000628343 IGKV3-20P01619 116 aa9.91□□□□□ -0.82
SOX2-OT-246ENST00000628343 CXCL2P19875 107 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms