RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 ZNF345Q14585 488 aa14.28□□□□□ -0.12
SQSTM1-216ENST00000626660 OR11H4Q8NGC9 324 aa14.28□□□□□ -0.12
SQSTM1-216ENST00000626660 TMEM37Q8WXS4 190 aa14.28□□□□□ -0.12
SQSTM1-216ENST00000626660 A0A1B0GVG6 124 aa14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 OR11H12B2RN74 326 aa14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 K7EQG2 157 aa14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 ATF4P18848 351 aaPredicted RBP14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 FFAR4Q5NUL3 377 aa14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 HSD17B11Q8NBQ5 300 aa14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 TUBA4BQ9H853 241 aa14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 UBQLN2Q9UHD9 624 aa14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 TIMM9Q9Y5J7 89 aa14.27□□□□□ -0.13
SQSTM1-216ENST00000626660 A0A0D9SG52 128 aa14.26□□□□□ -0.13
SQSTM1-216ENST00000626660 MEOX2P50222 304 aa14.26□□□□□ -0.13
SQSTM1-216ENST00000626660 SAMD13Q5VXD3 122 aa14.26□□□□□ -0.13
SQSTM1-216ENST00000626660 RPL7L1Q6DKI1 246 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-216ENST00000626660 KCNRGQ8N5I3 272 aa14.26□□□□□ -0.13
SQSTM1-216ENST00000626660 DCANP1Q8TF63 244 aa14.26□□□□□ -0.13
SQSTM1-216ENST00000626660 FAM110AQ9BQ89 295 aa14.26□□□□□ -0.13
SQSTM1-216ENST00000626660 JTBO76095 146 aa14.25□□□□□ -0.13
SQSTM1-216ENST00000626660 IGHV4-30-4P0DP06 118 aa14.25□□□□□ -0.13
SQSTM1-216ENST00000626660 ODF3L2Q3SX64 289 aa14.25□□□□□ -0.13
SQSTM1-216ENST00000626660 GCSAMLQ5JQS6 135 aa14.25□□□□□ -0.13
SQSTM1-216ENST00000626660 BPIFA4PQ86YQ2 179 aa14.25□□□□□ -0.13
SQSTM1-216ENST00000626660 DEFB125Q8N687 156 aa14.25□□□□□ -0.13
SQSTM1-216ENST00000626660 C1QBP02746 253 aa14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 ID1P41134 155 aa14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 SNRPD3P62318 126 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 ACOT6Q3I5F7 207 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 FAM78BQ5VT40 261 aa14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 GNPNAT1Q96EK6 184 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 ARPC5LQ9BPX5 153 aa14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 PSMG3Q9BT73 122 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 WFDC10AQ9H1F0 79 aa14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 SRD5A3Q9H8P0 318 aa14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 MAP6D1Q9H9H5 199 aa14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 C19orf73Q9NVV2 129 aa14.24□□□□□ -0.13
SQSTM1-216ENST00000626660 ZNF688P0C7X2 276 aa14.23□□□□□ -0.13
SQSTM1-216ENST00000626660 ATP6V0CP27449 155 aa14.23□□□□□ -0.13
SQSTM1-216ENST00000626660 MRPL32Q9BYC8 188 aaKnown RBP14.23□□□□□ -0.13
SQSTM1-216ENST00000626660 SEPSECSQ9HD40 501 aaKnown RBP14.23□□□□□ -0.13
SQSTM1-216ENST00000626660 KANTRA0A1W2PQU2 76 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 A8MZ25 164 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 PFDN1O60925 122 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 CXCL2P19875 107 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 DEFB131AP59861 70 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 MORN5Q5VZ52 161 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 FAM24BQ8N5W8 94 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 OR2G3Q8NGZ4 309 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 C16orf92Q96LL3 132 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 HYLS1Q96M11 299 aa14.22□□□□□ -0.13
SQSTM1-216ENST00000626660 TRAV5A0A0B4J249 113 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 ISLRO14498 428 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 M6PRP20645 277 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 PSMB3P49720 205 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 RHOBP62745 196 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 SERF2P84101 59 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 PSMG4Q5JS54 123 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 LRRC20Q8TCA0 184 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 FUT9Q9Y231 359 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 RFNGQ9Y644 331 aa14.21□□□□□ -0.13
SQSTM1-216ENST00000626660 A0A087X0K7 114 aa14.2□□□□□ -0.14
SQSTM1-216ENST00000626660 BCL2L11O43521 198 aa14.2□□□□□ -0.14
SQSTM1-216ENST00000626660 MBP02144 154 aa14.2□□□□□ -0.14
SQSTM1-216ENST00000626660 FRMD6-AS1P0C7T7 363 aa14.2□□□□□ -0.14
SQSTM1-216ENST00000626660 TMUB2Q71RG4 321 aa14.2□□□□□ -0.14
SQSTM1-216ENST00000626660 APRG1Q8IVJ8 170 aa14.2□□□□□ -0.14
SQSTM1-216ENST00000626660 CYTL1Q9NRR1 136 aa14.2□□□□□ -0.14
SQSTM1-216ENST00000626660 A0A1W2PPV4 95 aa14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 MRPS12O15235 138 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 RAB2AP61019 212 aa14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 ZFP69Q49AA0 526 aa14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 SPATA31B1PQ5VZV4 182 aa14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 MIR17HGQ75NE6 70 aa14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 LINC00052Q96N35 136 aa14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 ZNF471Q9BX82 626 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 SH3BGRL3Q9H299 93 aa14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 TMEM14CQ9P0S9 112 aa14.19□□□□□ -0.14
SQSTM1-216ENST00000626660 SOCS3O14543 225 aa14.18□□□□□ -0.14
SQSTM1-216ENST00000626660 TAS2R45P59539 299 aa14.18□□□□□ -0.14
SQSTM1-216ENST00000626660 EIF5AP63241 154 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-216ENST00000626660 LCN15Q6UWW0 184 aa14.18□□□□□ -0.14
SQSTM1-216ENST00000626660 OR10G4Q8NGN3 311 aa14.18□□□□□ -0.14
SQSTM1-216ENST00000626660 OR10G9Q8NGN4 311 aa14.18□□□□□ -0.14
SQSTM1-216ENST00000626660 OR10G7Q8NGN6 311 aa14.18□□□□□ -0.14
SQSTM1-216ENST00000626660 B9D2Q9BPU9 175 aa14.18□□□□□ -0.14
SQSTM1-216ENST00000626660 CD300CQ08708 224 aa14.17□□□□□ -0.14
SQSTM1-216ENST00000626660 GUK1Q16774 197 aa14.17□□□□□ -0.14
SQSTM1-216ENST00000626660 FAM122CQ6P4D5 195 aa14.17□□□□□ -0.14
SQSTM1-216ENST00000626660 C17orf77Q96MU5 243 aa14.17□□□□□ -0.14
SQSTM1-216ENST00000626660 CITED4Q96RK1 184 aa14.17□□□□□ -0.14
SQSTM1-216ENST00000626660 SLC25A2Q9BXI2 301 aa14.17□□□□□ -0.14
SQSTM1-216ENST00000626660 HRH4Q9H3N8 390 aa14.17□□□□□ -0.14
SQSTM1-216ENST00000626660 LOC102724200A0A096LPH7 203 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-216ENST00000626660 OR7C2O60412 319 aa14.16□□□□□ -0.14
SQSTM1-216ENST00000626660 IGLC2P0DOY2 106 aa14.16□□□□□ -0.14
SQSTM1-216ENST00000626660 ZNF124Q15973 351 aa14.16□□□□□ -0.14
SQSTM1-216ENST00000626660 KHDC3LQ587J8 217 aa14.16□□□□□ -0.14
SQSTM1-216ENST00000626660 FAM167A-AS1Q96KT0 104 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms