RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 A0A0U1RRA0 63 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 RPL15P61313 204 aaKnown RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 ZNF726P1Q15940 193 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 CDPF1Q6NVV7 123 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 C17orf82Q86X59 251 aaPredicted RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 C20orf144Q9BQM9 153 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 VCX2Q9H322 139 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 MRPL27Q9P0M9 148 aaKnown RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 LY96Q9Y6Y9 160 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 RHOGP84095 191 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 ASCL4Q6XD76 172 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 Q6ZS49 121 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 TMEM105Q8N8V8 129 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 SLC25A39Q9BZJ4 359 aaPredicted RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 CYSLTR1Q9Y271 337 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 COX11Q9Y6N1 276 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 PLXNA3P51805 1871 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 TMEM262E9PQX1 116 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 KIR3DS1Q14943 382 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 RASL11AQ6T310 242 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 CENPVQ7Z7K6 275 aaPredicted RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 Q8TAT8 98 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 LINC00527Q9UJ94 153 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 A8MWV9 139 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 SMKR1H3BMG3 65 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 STPG4Q8N801 248 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 VOPP1Q96AW1 172 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 ABHD17AQ96GS6 310 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 SLC50A1Q9BRV3 221 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 WIPF3A6NGB9 483 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 CKS1BP61024 79 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 Q0VFX4 171 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 IGFL4Q6B9Z1 124 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 Q6ZWC4 215 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 FAM57AQ8TBR7 257 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 MYLKQ15746 1914 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 IGKV1-16P04430 117 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 Q0VG73 95 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 ORMDL2Q53FV1 153 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 ZC2HC1BQ5TFG8 222 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 AMN1Q8IY45 258 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 DUX3Q96PT4 197 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 NDUFS8O00217 210 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 PSCAO43653 123 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 TMEM200BQ69YZ2 307 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 RPRMLQ8N4K4 120 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 ZNF114Q8NC26 417 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 C18orf32Q8TCD1 76 aa4.6□□□□□ -1.67
ERCC6-213ENST00000624341 F2Z2F3 143 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 CD5LO43866 347 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 HTN3P15516 51 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 SRD5A1P18405 259 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 PRTN3P24158 256 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 IFI27P40305 119 aaPredicted RBP4.59□□□□□ -1.67
ERCC6-213ENST00000624341 PAX2Q02962 417 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 CCL19Q99731 98 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 IGKV1D-17A0A075B6S4 117 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 TRAV21A0A0B4J279 112 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 TRBV7-9A0A0J9YWB2 115 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.59□□□□□ -1.67
ERCC6-213ENST00000624341 IGLC2P0DOY2 106 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 IGLC3P0DOY3 106 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 B3GALT5-AS1P59052 145 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 ITLN2Q8WWU7 325 aaPredicted RBP4.59□□□□□ -1.67
ERCC6-213ENST00000624341 ANAPC10Q9UM13 185 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 A0A1B0GWJ7 208 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 IGKV1-39P01597 117 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 IGKV1D-39P04432 117 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 RNASE2P10153 161 aaKnown RBP4.59□□□□□ -1.67
ERCC6-213ENST00000624341 LAGE3Q14657 143 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 TMEM167AQ8TBQ9 72 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 RNASE6Q93091 150 aaKnown RBP4.59□□□□□ -1.67
ERCC6-213ENST00000624341 ZNRD1Q9P1U0 126 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 VWA8A3KMH1 1905 aa4.59□□□□□ -1.67
ERCC6-213ENST00000624341 H3BRM9 83 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 NTN3O00634 580 aaPredicted RBP4.59□□□□□ -1.68
ERCC6-213ENST00000624341 ZNF883P0CG24 379 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 FOXL2NBQ6ZUU3 175 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 MBNL3Q9NUK0 354 aaKnown RBP4.59□□□□□ -1.68
ERCC6-213ENST00000624341 YLPM1P49750 1951 aaKnown RBP4.59□□□□□ -1.68
ERCC6-213ENST00000624341 ARMS2P0C7Q2 107 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 ESDP10768 282 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 PAX1P15863 534 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 LCNL1Q6ZST4 164 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 MRPL52Q86TS9 123 aaKnown RBP4.59□□□□□ -1.68
ERCC6-213ENST00000624341 TRGV9Q99603 122 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 SLC25A2Q9BXI2 301 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 SMPXQ9UHP9 88 aa4.59□□□□□ -1.68
ERCC6-213ENST00000624341 IGHV2-26A0A0B4J1V2 119 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 H0YJW9 148 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 SH2D1AO60880 128 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 ASPHD1Q5U4P2 390 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 ZNF329Q86UD4 541 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 TMEM158Q8WZ71 300 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 CST9LQ9H4G1 147 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 CNTFRP26992 372 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 PSG3Q16557 428 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 OCIAD2Q56VL3 154 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 C3orf56Q8N813 242 aa4.58□□□□□ -1.68
ERCC6-213ENST00000624341 LINC01587Q99440 93 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms