RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 RNF24Q9Y225 148 aa10.28□□□□□ -0.76
PCDHGC3-208ENST00000622836 ISLRO14498 428 aa10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 SPP1P10451 314 aa10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 RPL7P18124 248 aaKnown RBP10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 FGF7P21781 194 aa10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 PSMB3P49720 205 aa10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 EWSR1Q01844 656 aaKnown RBP eCLIP10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 TRPT1Q86TN4 253 aaKnown RBP10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 WDR83OSQ9Y284 106 aa10.27□□□□□ -0.77
PCDHGC3-208ENST00000622836 MPC2O95563 127 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 NHLH2Q02577 135 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 CLINT1Q14677 625 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 ZFAND6Q6FIF0 208 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 LINC00305Q7Z4B0 112 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 OR5C1Q8NGR4 320 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 GATAD1Q8WUU5 269 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 MED28Q9H204 178 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 AGRNO00468 2067 aa10.26□□□□□ -0.77
PCDHGC3-208ENST00000622836 ELOA3CA0A087WX78 387 aaPredicted RBP10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 H0YIZ8 118 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 SOCS3O14543 225 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 NUTF2P61970 127 aaKnown RBP10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 RGS21Q2M5E4 152 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 C10orf113Q5VZT2 155 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 MIC13Q5XKP0 118 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 PATE2Q6UY27 113 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 THAP6Q8TBB0 222 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 LRRC20Q8TCA0 184 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 RARRES2Q99969 163 aa10.25□□□□□ -0.77
PCDHGC3-208ENST00000622836 A0A0J9YWU9 116 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 MPDU1O75352 247 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 IGKV3-20P01619 116 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 B2MP61769 119 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 TMEM41BQ5BJD5 291 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 CASC10Q5T4H9 136 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 EBLN2Q6P2I7 272 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 OR1L4Q8NGR5 311 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 OR11H2Q8NH07 326 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 PFDN5Q99471 154 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 RPRMQ9NS64 109 aa10.24□□□□□ -0.77
PCDHGC3-208ENST00000622836 H3BMM0 161 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 RPL29P47914 159 aaKnown RBP10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 DEFB1P60022 68 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 FOXI2Q6ZQN5 318 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 ZNF709Q8N972 641 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 OR4B1Q8NGF8 309 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 TMEM37Q8WXS4 190 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 SAV1Q9H4B6 383 aaPredicted RBP10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 DNAJC4Q9NNZ3 241 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 SLC39A9Q9NUM3 307 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 MBD2Q9UBB5 411 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 PXMP4Q9Y6I8 212 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
PCDHGC3-208ENST00000622836 CXCL3P19876 107 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 C4BPBP20851 252 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 RPL12P30050 165 aaKnown RBP10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 PRR20EP86478 221 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 PRR20CP86479 221 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 PRR20DP86480 221 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 PRR20BP86481 221 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 PRR20AP86496 221 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 OPCMLQ14982 345 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 FCN2Q15485 313 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 GDF5OSQ5U4N7 250 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 BPIFA4PQ86YQ2 179 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 RNF126Q9BV68 326 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 C1QTNF4Q9BXJ3 329 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 NPCDR1Q9BY65 106 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 CLEC5AQ9NY25 188 aa10.22□□□□□ -0.77
PCDHGC3-208ENST00000622836 F6UB75 175 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 SPATA31B1PQ5VZV4 182 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 IGFL4Q6B9Z1 124 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 RNF182Q8N6D2 247 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 ZNF738Q8NE65 137 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 CHAC2Q8WUX2 184 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 C20orf173Q96LM9 149 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 ATP5SQ99766 215 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 SMIM3Q9BZL3 60 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 KCNIP2Q9NS61 270 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 XCL2Q9UBD3 114 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 HSPB11Q9Y547 144 aa10.21□□□□□ -0.77
PCDHGC3-208ENST00000622836 A0A087X0K7 114 aa10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 C17orf112F2Z3M2 114 aa10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 IFNA5P01569 189 aa10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 SNRPCP09234 159 aaKnown RBP10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 FXYD7P58549 80 aa10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 FAM78BQ5VT40 261 aa10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 OR11H7Q8NGC8 314 aa10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 C17orf77Q96MU5 243 aa10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 WDR61Q9GZS3 305 aaKnown RBP10.2□□□□□ -0.78
PCDHGC3-208ENST00000622836 TRAV8-2A0A0B4J237 113 aa10.19□□□□□ -0.78
PCDHGC3-208ENST00000622836 A0A0J9YX75 114 aa10.19□□□□□ -0.78
PCDHGC3-208ENST00000622836 GIG44P09565 113 aaPredicted RBP10.19□□□□□ -0.78
PCDHGC3-208ENST00000622836 MORN5Q5VZ52 161 aa10.19□□□□□ -0.78
PCDHGC3-208ENST00000622836 LCN15Q6UWW0 184 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms