RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 DTX2Q86UW9 622 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 CIARTQ8N365 385 aaPredicted RBP9.43□□□□□ -0.9
TP53-227ENST00000622645 FAM19A2Q8N3H0 131 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 RNF125Q96EQ8 232 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 SMIM12Q96EX1 92 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 FANCD2OSQ96PS1 177 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 ASCL2Q99929 193 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 SHANK2-AS3Q9BTD1 123 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 PRSS22Q9GZN4 317 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 RPP21Q9H633 154 aaKnown RBP9.43□□□□□ -0.9
TP53-227ENST00000622645 IGLV2-11P01706 119 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 P01737 135 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 KRTDAPP60985 99 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 NUTF2P61970 127 aaKnown RBP9.43□□□□□ -0.9
TP53-227ENST00000622645 PRNTQ86SH4 94 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 C18orf32Q8TCD1 76 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 GTSF1Q8WW33 167 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 KCNS1Q96KK3 526 aa9.43□□□□□ -0.9
TP53-227ENST00000622645 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 GNG7O60262 68 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 FCGR2BP31994 310 aaPredicted RBP9.42□□□□□ -0.9
TP53-227ENST00000622645 RASL11AQ6T310 242 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 ZNF562Q6V9R5 426 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 ZNF705AQ6ZN79 300 aaPredicted RBP9.42□□□□□ -0.9
TP53-227ENST00000622645 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 NRN1Q9NPD7 142 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 TRBV19A0A075B6N1 114 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 TCAPO15273 167 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 IGHV3-23P01764 117 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 Q86TA4 180 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 ARPC1AQ92747 370 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 PAM16Q9Y3D7 125 aa9.42□□□□□ -0.9
TP53-227ENST00000622645 IGLV11-55A0A075B6I3 123 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 H3BRN7 92 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 M0R143 59 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 HOXB4P17483 251 aaPredicted RBP9.41□□□□□ -0.9
TP53-227ENST00000622645 DAZAP1Q96EP5 407 aaKnown RBP9.41□□□□□ -0.9
TP53-227ENST00000622645 PGLYRP4Q96LB8 373 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 A0A1B0GXF2 115 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 A8MWL6 223 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 ZNF324O75467 553 aaPredicted RBP9.41□□□□□ -0.9
TP53-227ENST00000622645 IGLC2P0DOY2 106 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 NTF3P20783 257 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 OR4F17Q8NGA8 305 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 UBTD1Q9HAC8 227 aa9.41□□□□□ -0.9
TP53-227ENST00000622645 F8W735 103 aaPredicted RBP9.4□□□□□ -0.9
TP53-227ENST00000622645 COL8A1P27658 744 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 CCDC144NLQ6NUI1 221 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 C1orf122Q6ZSJ8 110 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 ZNF785A8K8V0 405 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 M0R3E3 92 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 RAB4AP20338 218 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 Q56UQ5 140 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 SIGLEC15Q6ZMC9 328 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 Q8N6K4 173 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.9
TP53-227ENST00000622645 ZNF492Q9P255 531 aa9.4□□□□□ -0.9
TP53-227ENST00000622645 CACNA1BQ00975 2339 aa9.4□□□□□ -0.91
TP53-227ENST00000622645 WI2-2373I1.2A0A1W2PRP0 233 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 NPIPB5A8MRT5 1133 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 MRPS12O15235 138 aaKnown RBP9.39□□□□□ -0.91
TP53-227ENST00000622645 OR2J3O76001 311 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 NDUFB8O95169 186 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 HLA-DRB1P01911 266 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 TMEM11P17152 192 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 MFAP4P55083 255 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 ATP5L2Q7Z4Y8 100 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 NIT1Q86X76 327 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 Q8N976 141 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 HBBP68871 147 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 TTC9CQ8N5M4 171 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 ZNF414Q96IQ9 312 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 VAMP8Q9BV40 100 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 SIRPDQ9H106 197 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 C21orf62Q9NYP8 219 aa9.39□□□□□ -0.91
TP53-227ENST00000622645 DIRC3C9JPN6 131 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 UQCRFS1P47985 274 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 CT83Q5H943 113 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 FAM120AOSQ5T036 256 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 SPTAN1Q13813 2472 aaKnown RBP9.38□□□□□ -0.91
TP53-227ENST00000622645 OR2T8A6NH00 312 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 EGR2P11161 476 aaPredicted RBP9.38□□□□□ -0.91
TP53-227ENST00000622645 G0S2P27469 103 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
TP53-227ENST00000622645 ZC2HC1AQ96GY0 325 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 ITPR1Q14643 2758 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 IGHV3OR16-8A0A075B7F1 116 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 TRAV30A0A087WSZ9 112 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 IGHV7-81A0A0B4J1V7 117 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 NPIPB6E9PJ23 425 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 C3orf79P0CE67 100 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 EBI3Q14213 229 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 MINOS1Q5TGZ0 78 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 RBPMS2Q6ZRY4 209 aaKnown RBP9.38□□□□□ -0.91
TP53-227ENST00000622645 MINOS1-NBL1R4GNA1 71 aa9.38□□□□□ -0.91
TP53-227ENST00000622645 IGHV3-35A0A0C4DH35 117 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms