RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	NPFFR1	Q9GZQ6	430 aa		11.52	□□□□□ -0.56
SYNRG-231	ENST00000622045	ZFHX4	Q86UP3	3567 aa		11.52	□□□□□ -0.56
SYNRG-231	ENST00000622045	POLE	Q07864	2286 aa		11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	TEX48	A0A1B0GUV7	120 aa		11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	IFI27	P40305	119 aa	Predicted RBP	11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	NDFIP1	Q9BT67	221 aa		11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	PPIAL4C	A0A0B4J2A2	164 aa		11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	PPIAL4G	P0DN37	164 aa		11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	FGF6	P10767	208 aa		11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	LINC00312	Q9Y6C7	94 aa		11.52	□□□□□ -0.57
SYNRG-231	ENST00000622045	C19orf67	A6NJJ6	358 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	AZU1	P20160	251 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	CSN1S1	P47710	185 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	DIAPH2-AS1	Q14236	149 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	GUCD1	Q96NT3	240 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	FAM222B	Q8WU58	562 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	PRSS22	Q9GZN4	317 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	GOLT1A	Q6ZVE7	132 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	RPRML	Q8N4K4	120 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	FAM169B	Q8N8A8	192 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	MLST8	Q9BVC4	326 aa		11.51	□□□□□ -0.57
SYNRG-231	ENST00000622045	TMSB15B	A0A087X1C1	80 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	GCSH	P23434	173 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	GATA4	P43694	442 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	FAM27E3	Q08E93	113 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	VMA21	Q3ZAQ7	101 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	NEGR1	Q7Z3B1	354 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	TTTY13	Q9BZ97	58 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045		Q9H3A6	140 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045		A0A1W2PPM0	123 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	ZNF833P	Q6ZTB9	187 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	EXOC3-AS1	Q8N2X6	119 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	CCL17	Q92583	94 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	BOD1L1	Q8NFC6	3051 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	IGKV1D-37	A0A075B6S9	117 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	C19orf71	A6NCJ1	209 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045		K7ERJ3	54 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	FABP2	P12104	132 aa		11.5	□□□□□ -0.57
SYNRG-231	ENST00000622045	IGLV3-9	A0A075B6K5	115 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	TCRA	P04437	139 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	OR5AN1	Q8NGI8	311 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	TMEM167A	Q8TBQ9	72 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	TNFRSF1A	P19438	455 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	MYCNOS	P40205	109 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	TMEM30B	Q3MIR4	351 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	SEM1	Q6ZVN7	128 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	PIP4P2	Q8N4L2	257 aa		11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	SMAD7	O15105	426 aa	Known RBP	11.49	□□□□□ -0.57
SYNRG-231	ENST00000622045	HSD52	Q0P140	79 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	SOX21	Q9Y651	276 aa	Predicted RBP	11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045		A0A1B0GUT8	65 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	WT1	P19544	449 aa	Predicted RBP	11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	TMEM200B	Q69YZ2	307 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	TPSG1	Q9NRR2	321 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	DCHS1	Q96JQ0	3298 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045		A0A1W2PPI3	338 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	LTA	P01374	205 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	FCGR2B	P31994	310 aa	Predicted RBP	11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	LYZ	P61626	148 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	SAMD5	Q5TGI4	173 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	ZADH2	Q8N4Q0	377 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	INSIG2	Q9Y5U4	225 aa		11.48	□□□□□ -0.57
SYNRG-231	ENST00000622045	FSTL3	O95633	263 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	MTURN	Q8N3F0	131 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	C18orf15	Q96N68	181 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	KLF12	Q9Y4X4	402 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045		A0A1W2PRD5	423 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045		A0A1W2PRF3	423 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045		A0A1W2PRM7	423 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	C22orf46	C9J442	243 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	NDUFB3	O43676	98 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	TNFRSF14	Q92956	283 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	FMC1	Q96HJ9	113 aa		11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	COLQ	Q9Y215	455 aa	Predicted RBP	11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.47	□□□□□ -0.57
SYNRG-231	ENST00000622045	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045	MBD3L3	A6NE82	208 aa	Predicted RBP	11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045	CD40	P25942	277 aa		11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045	PSG3	Q16557	428 aa		11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045	BOD1L2	Q8IYS8	172 aa		11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045	HAX1	O00165	279 aa		11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045	LINC00574	Q9H8X3	128 aa		11.46	□□□□□ -0.57
SYNRG-231	ENST00000622045		D6R8Y8	96 aa		11.46	□□□□□ -0.58
SYNRG-231	ENST00000622045		Q86TA4	180 aa		11.46	□□□□□ -0.58
SYNRG-231	ENST00000622045	CGB1	A6NKQ9	187 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	SMKR1	H3BMG3	65 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	ADAMTSL5	Q6ZMM2	481 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	THAP8	Q8NA92	274 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	WFDC12	Q8WWY7	111 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	ZNF492	Q9P255	531 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	DKK2	Q9UBU2	259 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	DSCAML1	Q8TD84	2053 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	PPIAL4E	A0A075B759	164 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045		A0A096LNJ9	63 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	PPIAL4F	P0DN26	164 aa		11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	RPL27A	P46776	148 aa	Known RBP	11.45	□□□□□ -0.58
SYNRG-231	ENST00000622045	PRB3	Q04118	309 aa	Predicted RBP	11.45	□□□□□ -0.58

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